Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01923 and BPUM_1077
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:27
# Commandline: needle
# -asequence dna-align/BSNT_01923___spxA.1.24716.seq
# -bsequence dna-align/BPUM_1077___spxA.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01923___spxA-BPUM_1077___spxA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01923___spxA-BPUM_1077___spxA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01923___spxA
# 2: BPUM_1077___spxA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 400
# Identity: 315/400 (78.8%)
# Similarity: 315/400 (78.8%)
# Gaps: 8/400 ( 2.0%)
# Score: 1244.0
#
#
#=======================================
BSNT_01923___ 1 ATGGTTACACTATACACATCACCAAGCTGTACTTCATGCAGAAAGGCGAG 50
|||||.|||.||||||||||||||||||||||.|||||.|||||.||.||
BPUM_1077___s 1 ATGGTAACATTATACACATCACCAAGCTGTACATCATGTAGAAAAGCAAG 50
BSNT_01923___ 51 AGCGTGGCTCGAGGAGCACGATATTCCATTTGTAGAAAGAAACATTTTCT 100
|||||||.|.||.||.|||.|||||||.|.|..|||.||||||||.||.|
BPUM_1077___s 51 AGCGTGGTTAGAAGAACACAATATTCCGTATCAAGAGAGAAACATCTTTT 100
BSNT_01923___ 101 CTGAACCTTTATCAATTGATGAAATAAAACAAATTCTTCGAATGACTGAG 150
|.||.|||.|.|||||.||||||||.|||.|||||||||||||||||||.
BPUM_1077___s 101 CAGAGCCTCTTTCAATCGATGAAATTAAAGAAATTCTTCGAATGACTGAA 150
BSNT_01923___ 151 GATGGAACAGATGAAATCATCTCAACCCGTTCAAAAGTATTCCAAAAACT 200
||.||.|||||||||||.||||||||.||||||||||||||||||||.||
BPUM_1077___s 151 GACGGTACAGATGAAATTATCTCAACACGTTCAAAAGTATTCCAAAAGCT 200
BSNT_01923___ 201 GAATGTGAACGTTGAATCTATGCCGCTGCAAGATTTGTACCGCT----TG 246
.||||||||.|||||..|.|||||.||.|||.|.||||| | |.
BPUM_1077___s 201 AAATGTGAATGTTGAGACAATGCCTCTTCAACAATTGTA----TAAACTA 246
BSNT_01923___ 247 ATCAACGAGCATCCAGGGTTGCTTCGCCGTCCGATCATCATTGACGAAAA 296
|||||.|||||||||||..|..|..|.|||||.||||||.|.||.|||||
BPUM_1077___s 247 ATCAATGAGCATCCAGGTCTTTTAAGACGTCCAATCATCTTGGATGAAAA 296
BSNT_01923___ 297 ACGTTTGCAGGTAGGATATAACGAAGACGAAATCAGACGTTTCCTGCCAA 346
|.|..|.||.||.||.||.||.|||||.|||||.|||||||||||.||||
BPUM_1077___s 297 AAGACTACAAGTTGGCTACAATGAAGATGAAATTAGACGTTTCCTTCCAA 346
BSNT_01923___ 347 GAAAAGTTCGCTCTTTCCAATTAAGAGAAGCACAGCGTTTGGCAAACTAA 396
|||..|||||..|.||||||.|.||||||||.|||||..|.||.||||||
BPUM_1077___s 347 GAACGGTTCGTACATTCCAACTCAGAGAAGCTCAGCGACTTGCTAACTAA 396
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