Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01422 and BPUM_0798
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:00
# Commandline: needle
# -asequence dna-align/BSNT_01422___sspK.1.24716.seq
# -bsequence dna-align/BPUM_0798___sspK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01422___sspK-BPUM_0798___sspK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01422___sspK-BPUM_0798___sspK.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01422___sspK
# 2: BPUM_0798___sspK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 167
# Identity: 107/167 (64.1%)
# Similarity: 107/167 (64.1%)
# Gaps: 31/167 (18.6%)
# Score: 299.0
#
#
#=======================================
BSNT_01422___ 1 ATGGTCCGAAATAAAGAAAAAGGATTTCCTTACGAAAAC----GAA-AAC 45
||| ||.|||||||.||||||.||||| |||.| ||| .||
BPUM_0798___s 1 ATG---CGTAATAAAGCAAAAGGCTTTCC-----AAATCAAGTGAATCAC 42
BSNT_01422___ 46 AAATTTCAGGGTGAACCGAGAGCAAAGGACGACTATGCTTC--AAAG--C 91
||||||.|.||.||.||..|.||.|..||.|..|||||.|| |||| |
BPUM_0798___s 43 AAATTTGAAGGCGAGCCAGGCGCCACAGATGCTTATGCGTCTAAAAGGCC 92
BSNT_01422___ 92 G--TGCT--GACGGATCTATCAAT-CAGCATCCTCAAGAAAGAATGAGAG 136
| ||.| |||| ||| || |.|||.||.|||.|.|||||.|
BPUM_0798___s 93 GAATGGTGAGACG--------AATACA-CGTCCACAGGAACGTATGAGGG 133
BSNT_01422___ 137 CCTCAGGCAAACGGTAA 153
|.|||||.|||||.|||
BPUM_0798___s 134 CATCAGGGAAACGCTAA 150
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