Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00137 and BPUM_0064
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:05
# Commandline: needle
# -asequence dna-align/BSNT_00137___yazB.1.24716.seq
# -bsequence dna-align/BPUM_0064___yazB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00137___yazB-BPUM_0064___yazB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00137___yazB-BPUM_0064___yazB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00137___yazB
# 2: BPUM_0064___yazB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 248
# Identity: 156/248 (62.9%)
# Similarity: 156/248 (62.9%)
# Gaps: 52/248 (21.0%)
# Score: 499.0
#
#
#=======================================
BSNT_00137___ 1 ATGGAAGCAGAAATCTGGGGTAGACGAATTCGTGCATTCAGAAAGCTGAA 50
||||||..|||..|.|||||||||.||||||||||||.|.|||||||.||
BPUM_0064___y 1 ATGGAAAAAGACGTGTGGGGTAGAAGAATTCGTGCATACCGAAAGCTAAA 50
BSNT_00137___ 51 AGGTTATACTCAAGAAGGATTTGC-AAAAGCATTAGGTATATCAGTTTCT 99
|||.||||||||.|||||.||.|| ||||| |.|.||.||.||.||.|||
BPUM_0064___y 51 AGGGTATACTCAGGAAGGGTTCGCGAAAAG-ACTTGGCATCTCTGTCTCT 99
BSNT_00137___ 100 ATTCTCGGCGAAATTGAACGCGGAAACCGATTGCCGTCAGCTGCCATCAT 149
.|..|.||.||||||||.||.||.||.|||||.||..|| ..||| ||
BPUM_0064___y 100 GTCTTAGGAGAAATTGAGCGGGGCAATCGATTACCAACA--AACCA--AT 145
BSNT_00137___ 150 -------TCAAGATGCAGCAGATGTTTTAAATATAAGTGCGGACGAA--T 190
|||| || ||||||||.|||||||||||..|.|||.||| |
BPUM_0064___y 146 TGGTTGGTCAA-AT--AGCAGATGCTTTAAATATAACGGTGGAAGAACTT 192
BSNT_00137___ 191 TGGCGCCGCC---------AGAAAAATAG------------------- 210
| |.|| ||||.|| ||
BPUM_0064___y 193 T-----CACCAAATCTTGAAGAAGAA-AGGAGGGGAAATGATGTTTAA 234
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