Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00093 and BPUM_0038
See
Amino acid alignment /
Visit
BSNT_00093 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:01
# Commandline: needle
# -asequence dna-align/BSNT_00093___yabK.1.24716.seq
# -bsequence dna-align/BPUM_0038___yabK.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00093___yabK-BPUM_0038___yabK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00093___yabK-BPUM_0038___yabK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00093___yabK
# 2: BPUM_0038___yabK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 239
# Identity: 184/239 (77.0%)
# Similarity: 184/239 (77.0%)
# Gaps: 16/239 ( 6.7%)
# Score: 727.5
#
#
#=======================================
BSNT_00093___ 1 ATGGCTTTGCATTATTATTGTCGTCATTGCGGAGTGAAAGTAGGCAGTCT 50
|||||||||||||||||.||.||.||.||.||.||.||.||.||||||||
BPUM_0038___y 1 ATGGCTTTGCATTATTACTGCCGGCACTGTGGTGTAAAGGTTGGCAGTCT 50
BSNT_00093___ 51 ---CGAATC-----TTCAATGGTATCGACAGACTCACTTGGATTTCAGCA 92
.||||| ||||| |..||..||||.||||||||.||
BPUM_0038___y 51 AGATGAATCTGCTGTTCAA--------AGTGAAGCACTCGGATTTCATCA 92
BSNT_00093___ 93 CTTAACAAATGAGGAAAGAAACGATATGATTTCTTATAAAGAAAATGGAG 142
||||||||||||||||||||||||||||||||||||||..||||||||.|
BPUM_0038___y 93 CTTAACAAATGAGGAAAGAAACGATATGATTTCTTATAGGGAAAATGGTG 142
BSNT_00093___ 143 ATGTCCATGTTTTGACGATATGTGAAGACTGCCAAGAGGCGCTTGACCGA 192
||.|.|||||....||.||.|||||.||.||||||||||||||.||..||
BPUM_0038___y 143 ATTTACATGTGCAAACCATTTGTGAGGATTGCCAAGAGGCGCTCGAAAGA 192
BSNT_00093___ 193 AATCCGCATTACCACGAATATCACACATTTATTCAATAA 231
|||||..|||||||..|.|||||.||.||||||||||||
BPUM_0038___y 193 AATCCTGATTACCATCAGTATCATACCTTTATTCAATAA 231
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.