Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00063 and BPUM_0015
See
Amino acid alignment /
Visit
BSNT_00063 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:20:59
# Commandline: needle
# -asequence dna-align/BSNT_00063___holB.1.24716.seq
# -bsequence dna-align/BPUM_0015___holB.2.24716.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00063___holB-BPUM_0015___holB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00063___holB-BPUM_0015___holB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00063___holB
# 2: BPUM_0015___holB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1006
# Identity: 764/1006 (75.9%)
# Similarity: 764/1006 (75.9%)
# Gaps: 32/1006 ( 3.2%)
# Score: 2831.0
#
#
#=======================================
BSNT_00063___ 1 ATGGCAA-TATCTTGGAAGGAAATGAACGAGCTTCAGCCCAGAGTGATGA 49
||||||| ||.| |||.|.||.|||||.||..|.|||||..|.||.|||.
BPUM_0015___h 1 ATGGCAATTAGC-TGGGATGACATGAATGATTTGCAGCCGCGCGTCATGC 49
BSNT_00063___ 50 AGCTTTTATATAATAGTATTGAGAAGGACAGACTATCACACGCTTATTTG 99
.|||..|.|.||||||||||||.||.|||.||||..|.||.||.||.||.
BPUM_0015___h 50 GGCTGATTTTTAATAGTATTGATAAAGACCGACTTGCGCATGCCTACTTA 99
BSNT_00063___ 100 TTTGAGGGAAAAAAAGGAACAGGCAAGCTTGATGCCGCGCTGCTTCTTGC 149
|||||.|||||||||||.||.||.||||..|||||.|||.||||.||.||
BPUM_0015___h 100 TTTGAAGGAAAAAAAGGGACCGGTAAGCAGGATGCTGCGATGCTACTAGC 149
BSNT_00063___ 150 AAAAAGCTTCTTTTGTCTGGAGGAT--GGCGCGGAGCCTTGTGAGAGCTG 197
|||.|||||.|||||..|||| || ||.|.|.|.||.|||||...|||
BPUM_0015___h 150 AAAGAGCTTTTTTTGCTTGGA--ATCAGGAGTGAAACCGTGTGAATCCTG 197
BSNT_00063___ 198 CCGAAACTGTAAACGGATAGAGTCAGGGAACCATCCTGATCTCCATCTTG 247
||.|||.|||||..||||.||||||||.||||||||.|||.|.|||||..
BPUM_0015___h 198 CCAAAATTGTAAGAGGATTGAGTCAGGAAACCATCCCGATTTACATCTCA 247
BSNT_00063___ 248 TTCAGCCTGATGGCTTA-TCAATCAAAAAGGCGCAAATTCAAGCGCTCCA 296
|.||||||||||| |.| |||||.||.||.||||||.|.||.||..|.||
BPUM_0015___h 248 TGCAGCCTGATGG-TCAGTCAATTAAGAAAGCGCAAGTACAGGCATTGCA 296
BSNT_00063___ 297 AGAAGAGTTTTCTAAGACAGGACTTGAATCGCA--TAAAAAGCTGTATAT 344
|||.||||||.|.||..||||..|.|||||.|| .||||| |||||||
BPUM_0015___h 297 AGAGGAGTTTACAAAAGCAGGTGTGGAATCTCACCGAAAAA--TGTATAT 344
BSNT_00063___ 345 TATTTCGCACGCAGATCAAATGACAGCAAATGCGGCGAACAGCCTGCTGA 394
.|||...||.||.||..|||||||.|..||.||.||||||||..|..|||
BPUM_0015___h 345 CATTCTTCATGCGGACAAAATGACGGTCAACGCTGCGAACAGTTTATTGA 394
BSNT_00063___ 395 AATTTTTAGAAGAACCGAACAAAGACACAATGGCCGTCCTCATCACTGAG 444
|.||..||||.||.||.|||...||.||.|||||..|..|.||.||||||
BPUM_0015___h 395 AGTTCCTAGAGGAGCCTAACCGGGAAACGATGGCAATTTTAATTACTGAG 444
BSNT_00063___ 445 CAGCCCC--AAAGGTTAT--TGGATACCATCATTTCAAGATGCCAAACCC 490
||..|.| ||| || |||||||.||.|||||||||||.||.|..|
BPUM_0015___h 445 CAATCGCATAAA----ATGCTGGATACGATTATTTCAAGATGTCAGATGC 490
BSNT_00063___ 491 TTCCTTTTCAGCCTTTGCAACCGAAAGCAATTGA-----AGATA-GACTG 534
||...||||||||..||||.||..||.|..|.|| ||.|| .||
BPUM_0015___h 491 TTAGCTTTCAGCCACTGCAGCCTCAATCCTTGGAGCAGCAGCTATTAC-- 538
BSNT_00063___ 535 ATCGAACAGGACGTCTCGCCTCATATGGCAAGGCTTCTGGCCAACATGAC 584
||.|.|.|||.||.|..|||.|.|||||||||.||.|.||..|.||
BPUM_0015___h 539 ----AAGAAGGCGTATCTCAGCATCTTGCAAGGCTTTTGTCGAATTTAAC 584
BSNT_00063___ 585 CAATAATGTAGCAGAAGCAGTCGAATTAAGTCGAAATGATGAGTTTGCAG 634
|||.|||.|||||||||||.||||||||||||||||||||.|||||||||
BPUM_0015___h 585 CAACAATTTAGCAGAAGCACTCGAATTAAGTCGAAATGATCAGTTTGCAG 634
BSNT_00063___ 635 AGTCTAGAGCGAAAGTGATAAAATTGTATGAAGTCCTACACCAGCGGAAA 684
|||||||||||||||||||||||||||||||||||.||||||||||.|||
BPUM_0015___h 635 AGTCTAGAGCGAAAGTGATAAAATTGTATGAAGTCTTACACCAGCGAAAA 684
BSNT_00063___ 685 GGACATGCTTTTTTCTTTATTCAAGATCAATGGATGCCCTTTTTCAAAGA 734
|.||||||.|||||.|.|||.||.||||||||||||||.|||||||||||
BPUM_0015___h 685 GAACATGCATTTTTTTATATACAGGATCAATGGATGCCTTTTTTCAAAGA 734
BSNT_00063___ 735 AAAAACCCATCAAGAAATGGGTCTTGATATGCTCTTATTGATATATCGTG 784
.|||..||.||||||||..|||||.||||||||.|||||.||||||||||
BPUM_0015___h 735 GAAAGACCTTCAAGAAACAGGTCTGGATATGCTTTTATTTATATATCGTG 784
BSNT_00063___ 785 ATGTGTTGTCCATCCAAATAGGAAATGAAGATAAATTGATTTATCAAGAC 834
||||.|||||.||.|||||||||||||||||||||.|.||||||||||||
BPUM_0015___h 785 ATGTATTGTCGATTCAAATAGGAAATGAAGATAAAGTCATTTATCAAGAC 834
BSNT_00063___ 835 TTATTCCAATCAATAAAACAGCATGCGCTACAATCAACACAACAAAGCGT 884
||||||||..||||.||.|||||||||||.||.||.|||||.||.|..||
BPUM_0015___h 835 TTATTCCAGACAATGAAGCAGCATGCGCTGCATTCCACACAGCAGATGGT 884
BSNT_00063___ 885 TACGAATCAGATACTTGCTGTTTTAGAAGCAAAGAAACGGCTTCATTCCA 934
.|||||.|||||.||||||||.||||||||.||.||..|.|||||.||||
BPUM_0015___h 885 GACGAACCAGATCCTTGCTGTATTAGAAGCGAAAAAGAGACTTCAATCCA 934
BSNT_00063___ 935 ATGTGAATGTACAAGGATTAATGGAGCACTTGGTGTTAATGTTGCAGGAG 984
|.|||||||..|||||..|.||||||||.||||||||.||||||||||||
BPUM_0015___h 935 ACGTGAATGCCCAAGGGCTGATGGAGCAATTGGTGTTGATGTTGCAGGAG 984
BSNT_00063___ 985 GGATAA 990
||||||
BPUM_0015___h 985 GGATAA 990
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.