Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04466 and BL05307
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:39
# Commandline: needle
# -asequence dna-align/BSNT_04466___ytjA.1.5803.seq
# -bsequence dna-align/BL05307___ytjA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04466___ytjA-BL05307___ytjA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04466___ytjA-BL05307___ytjA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04466___ytjA
# 2: BL05307___ytjA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 233
# Identity: 175/233 (75.1%)
# Similarity: 175/233 (75.1%)
# Gaps: 10/233 ( 4.3%)
# Score: 640.0
#
#
#=======================================
BSNT_04466___ 1 ATGAAAACCCTATTCATCGCT-CTGATCAGAGGATATCAAAAATTCATCT 49
|||||||||.|||||.| ||| ||.|||.|....||||||||||..||.|
BL05307___ytj 1 ATGAAAACCGTATTCCT-GCTGCTCATCCGCTTTTATCAAAAATGGATAT 49
BSNT_04466___ 50 C----GCCCCTGACACCGCCAACGTGCCGCTTTTATCCGACCTGTTCCCA 95
| ||.|.| |||||.||.|||||.|||||||||||.||.|||.|
BL05307___ytj 50 CACCGGCTCTT----CCGCCGACCTGCCGTTTTTATCCGACATGCTCCAA 95
BSNT_04466___ 96 ATATGGAATCGAAGCGATTAAAACACATGGCGCTTTAAAAGGCGGATGGC 145
.||.||..|.||||||||..|||..||.|||||.||.|||||||||||||
BL05307___ytj 96 TTACGGTCTTGAAGCGATCGAAAAGCACGGCGCATTTAAAGGCGGATGGC 145
BSNT_04466___ 146 TGACAATCAAACGGATTTTGAAATGCCACCCGTTCCATCCGGGAGGAGTC 195
|.||.|||||.||||||.|.||||||||.|||||.|||||.||.|||.|.
BL05307___ytj 146 TCACCATCAAGCGGATTCTAAAATGCCATCCGTTTCATCCCGGCGGAATA 195
BSNT_04466___ 196 GATCCCGTTCCTGAAAAGAAACAAAAACATTAA 228
|||||||||||.|||||.||.|||||..||||.
BL05307___ytj 196 GATCCCGTTCCGGAAAAAAAGCAAAAGGATTAG 228
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