Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01888 and BL05108
See
Amino acid alignment /
Visit
BSNT_01888 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:24
# Commandline: needle
# -asequence dna-align/BSNT_01888___yjzC.1.5803.seq
# -bsequence dna-align/BL05108___yjzC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01888___yjzC-BL05108___yjzC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01888___yjzC-BL05108___yjzC.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01888___yjzC
# 2: BL05108___yjzC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 182
# Identity: 140/182 (76.9%)
# Similarity: 140/182 (76.9%)
# Gaps: 4/182 ( 2.2%)
# Score: 527.0
#
#
#=======================================
BSNT_01888___ 1 GTGGGACAGCAGCACCAATTCCGGCCCGGACAGAAAGCGCCTAATAACGG 50
.||||||||||||..|||||||||||.||.||.||||||||.|||||.||
BL05108___yjz 1 ATGGGACAGCAGCGTCAATTCCGGCCGGGCCAAAAAGCGCCCAATAATGG 50
BSNT_01888___ 51 TGTCTACGTAGAAATCGGCGAGACAGGGAGCATGGTTAAAAACCCTCA-- 98
.||.||.||.|||||||||||.||.||.|||||||||.|.||||||||
BL05108___yjz 51 AGTGTATGTGGAAATCGGCGAAACGGGAAGCATGGTTCAGAACCCTCAGC 100
BSNT_01888___ 99 AAAGGTCCATCTGTCAGCAGGGGAAATGTTCCCCGAAACATCAAACCACA 148
||| ||.|..||...||.||.||..|.|||||.|||||.||.||.||.|
BL05108___yjz 101 AAA--TCAAATTGAGCGCCGGCGAGTTCTTCCCTGAAACCTCCAATCATA 148
BSNT_01888___ 149 ACCGGCTGTGGACCTACAAAAGAAAGCCGTGA 180
|||||||.|||||.||.|||||||||||.|.|
BL05108___yjz 149 ACCGGCTCTGGACATATAAAAGAAAGCCTTAA 180
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.