Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00467 and BL05019
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:06
# Commandline: needle
# -asequence dna-align/BSNT_00467___tatAD.1.5803.seq
# -bsequence dna-align/BL05019___tatAD.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00467___tatAD-BL05019___tatAD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00467___tatAD-BL05019___tatAD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00467___tatAD
# 2: BL05019___tatAD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 237
# Identity: 145/237 (61.2%)
# Similarity: 145/237 (61.2%)
# Gaps: 48/237 (20.3%)
# Score: 449.0
#
#
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BSNT_00467___ 1 ATGTTTTCAAACATTGGAATACCGGGT------TTGATTCTGATCTTCGT 44
|||.|||||||.||.||.||.||.||| |||.||||| ||
BL05019___tat 1 ATGCTTTCAAATATCGGTATTCCTGGTCTCATCTTGGTTCTG------GT 44
BSNT_00467___ 45 CATCGCCCTCATTATTTTTGGCCCTTCCAAGCTGCCGGAAATCGGGCGTG 94
.||.||.||.||.|||||.||.|||||.|||||.|||||||||||.||.|
BL05019___tat 45 AATTGCGCTGATCATTTTCGGGCCTTCAAAGCTCCCGGAAATCGGCCGGG 94
BSNT_00467___ 95 CTGCCGGACGGACACTGCTGGAATTTAAAAGCGCCACAAAATCACTTGTG 144
||...|||...||.|||...|||||.||||||||.|||||.||..|.||.
BL05019___tat 95 CTTTTGGAAAAACGCTGACCGAATTCAAAAGCGCGACAAAGTCTTTAGTC 144
BSNT_00467___ 145 TCTGGTGATGAAAAAGAAGAGAAATCAGCTGAGCTGACAGCGGT------ 188
||||..|||||.||.|| ||.|.|||||.|||
BL05019___tat 145 TCTGCCGATGACAATGA-------------GATCGGACAGGGGTCTGATG 181
BSNT_00467___ 189 -AAAGCAGGACAAAAACGCG-------GGC----TGA 213
.|||.|| |||| ||| ||| |||
BL05019___tat 182 CGAAGAAG--CAAA---GCGATCCATCGGCACGATGA 213
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