Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05656 and BL03976
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:46
# Commandline: needle
# -asequence dna-align/BSNT_05656___ywkA.1.5803.seq
# -bsequence dna-align/BL03976___maeA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05656___ywkA-BL03976___maeA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05656___ywkA-BL03976___maeA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05656___ywkA
# 2: BL03976___maeA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1730
# Identity: 1285/1730 (74.3%)
# Similarity: 1285/1730 (74.3%)
# Gaps: 58/1730 ( 3.4%)
# Score: 4585.0
#
#
#=======================================
BSNT_05656___ 1 TTGAATAACATAAAAAAAACGAAAGAAGGCCACTTAGAAACAACTCTTAG 50
.||||.|||||.|.||.||||||.|||||.||.||.||.||..||.|..|
BL03976___mae 1 GTGAACAACATGAGAAGAACGAAGGAAGGACATTTGGAGACTTCTTTGCG 50
BSNT_05656___ 51 AGGAAAAGAAGTTTTATCTATTCCTACTTTAAATAAAGGCGTTGCTTTTT 100
.||.|||||.|||.|.||.|||||.||..||||||||||.|||||.||||
BL03976___mae 51 GGGTAAAGACGTTCTTTCCATTCCAACGCTAAATAAAGGTGTTGCATTTT 100
BSNT_05656___ 101 CAATAGAAGAAAGACAAGAA-CTCGGCTTAGAAGGGCTTCTGCCGCCAAC 149
|..|.||||||||| ||||| |||||..|||||||||||||||||||.||
BL03976___mae 101 CTCTTGAAGAAAGA-AAGAACCTCGGTCTAGAAGGGCTTCTGCCGCCGAC 149
BSNT_05656___ 150 TGTACTTTCT----CTTGATCAACAAGCACAACGCGCGTACGAGCAA--T 193
|| |||| ||||||||.||.|||.||||.||.|||||.||| |
BL03976___mae 150 TG----TTCTCAGCCTTGATCAGCAGGCAGAACGGGCTTACGAACAATTT 195
BSNT_05656___ 194 TCCAAGCG-CAGCCTGACCGCCTTCGTCAAAATGTTTACTTAAGTGATCT 242
||| || ||.||||||.|.|||||.|||||.||.||.||.|..||||
BL03976___mae 196 TCC---CGTCAACCTGACAGACTTCGCCAAAACGTATATTTGAACGATC- 241
BSNT_05656___ 243 TGC-AAACCGTAACGAAGTTCTTTTCTATAAATTGCTGAAAAACCATCTT 291
||| ||||.|.||||||||.||||||||||||||..||.|||||||.||.
BL03976___mae 242 TGCAAAACAGAAACGAAGTGCTTTTCTATAAATTATTGCAAAACCACCTG 291
BSNT_05656___ 292 CGCGAAATGCTTCCTGTTGTGTACACGCCAACAGTTGGTGAAGCGATTCA 341
||.|||||||||||.|||||.||.|||||.||.||.||.|||||||||||
BL03976___mae 292 CGTGAAATGCTTCCGGTTGTCTATACGCCTACTGTCGGCGAAGCGATTCA 341
BSNT_05656___ 342 GGAATACAGCCATGAATATAGAAGACCTCAAGGAATCTACTTGTCAATCG 391
||||||||||||.|||||..|.|||||.||.||..|.|||||||||||||
BL03976___mae 342 GGAATACAGCCACGAATACCGCAGACCGCACGGCGTTTACTTGTCAATCG 391
BSNT_05656___ 392 ACAACATTGACGGTATTGAAAAAGCGTTTGAAAACCTTCACGCGACAGCA 441
|..|.||.|||||.||.||||..||.|||.|||||||.||.||..|.||.
BL03976___mae 392 ATGATATGGACGGAATCGAAACGGCTTTTAAAAACCTGCAGGCATCTGCT 441
BSNT_05656___ 442 GGCGATATTGATCTTATCGTTGCTACTGACTCCGAAAGCATTCTCGGTAT 491
|..||.||.|||.|.|||||.|||||.||.||||||||||||.|.||.||
BL03976___mae 442 GATGACATCGATTTGATCGTCGCTACAGATTCCGAAAGCATTTTGGGGAT 491
BSNT_05656___ 492 CGGTGACTGGGGTGTAGGCGGTATTAATATCGCAATCGGTAAATTGGCTG 541
|||.||||||||.||.||.||.||.|||||.||.||.|||||..|.||.|
BL03976___mae 492 CGGCGACTGGGGCGTCGGAGGCATCAATATTGCGATTGGTAAGCTTGCAG 541
BSNT_05656___ 542 TTTACACTGCTGCAGCTGGTATTGACCCTAGCCGTGTTATCCCGGTTGTG 591
|.||.||.||.|||||.||.||.||.||.|||||.|||||||||||.||.
BL03976___mae 542 TATATACGGCGGCAGCGGGAATCGATCCGAGCCGCGTTATCCCGGTCGTA 591
BSNT_05656___ 592 CTTGATGTCGGTACGAACAACGAAAAACTTCTAAACGATCCTTTATATAT 641
||.||||||||.|||||.||.||||||||.|||||||||||..|.|||||
BL03976___mae 592 CTGGATGTCGGAACGAATAATGAAAAACTGCTAAACGATCCGCTCTATAT 641
BSNT_05656___ 642 TGGTAACAAGCATGAACGTGTTCAAGGTGAACGCTACGAAGCTTTCATTG 691
.||.|||...|||...|||||..||||.||.|||||.|||...||.||.|
BL03976___mae 642 CGGAAACCGTCATCCGCGTGTAGAAGGCGAGCGCTATGAACAATTTATCG 691
BSNT_05656___ 692 ACGCTTATGTAAAAGCTGCATTGAAATTCTTCCCTAAAGCGCTTCTTCAC 741
||||||||||..||.|.||||||||..|.||||||||.||||||||.|||
BL03976___mae 692 ACGCTTATGTCGAAACAGCATTGAAGCTTTTCCCTAACGCGCTTCTACAC 741
BSNT_05656___ 742 TGGGAAGACCTTGGCAACAAAAATGCACGCAACATCATGAAAAAATACAA 791
||||||||..|.||.||.||||||||.|||||.|||||||..|||||.||
BL03976___mae 742 TGGGAAGATTTCGGAAATAAAAATGCCCGCAATATCATGAGTAAATATAA 791
BSNT_05656___ 792 TCATGAAATCCTG--ACATTTAATGATGATATTCAAGGTACTGGCGCGAT 839
.|||.|||| || |||||||||||||||||||||||.||.||.||.||
BL03976___mae 792 CCATAAAAT--TGCAACATTTAATGATGATATTCAAGGAACAGGGGCTAT 839
BSNT_05656___ 840 TACACTTGCTGG-TGTGCTT---GCCGCTATGAAGAAAACAGGCGCTTCT 885
.|| ||||| ||.|.|| ||.|||.|.||.||.||.|||.|.|||
BL03976___mae 840 CAC----GCTGGCTGCGATTTTAGCAGCTGTCAAAAAGACCGGCACGTCT 885
BSNT_05656___ 886 ATTAAAGATCAGCGTGTTGTTATCTTCGGTGCCGGTTCTGCTGGTATCGG 935
.|.|||||.||.||.||.||.||||||||..|.||||||||||||||.||
BL03976___mae 886 TTGAAAGACCACCGGGTCGTCATCTTCGGACCTGGTTCTGCTGGTATAGG 935
BSNT_05656___ 936 TATTGCTGACCAAATCCGTGACACAATGGTGCTAGCCGGATTATCTGAAG 985
.||.||||||||||||||.|||||.||||||||.|..||..|.||.||||
BL03976___mae 936 AATCGCTGACCAAATCCGCGACACCATGGTGCTTGAAGGGCTTTCAGAAG 985
BSNT_05656___ 986 AAGAAGCTAACAAACGT---TTCTACACACTTGATTACAGAGGCTTGCTG 1032
||||||| |||.||| ||||..|||.|.|||||||||||.||..|.
BL03976___mae 986 AAGAAGC---CAACCGTGCATTCTGGACAGTCGATTACAGAGGATTATTA 1032
BSNT_05656___ 1033 ACTGA-AGACATCGAAGGCATCCTTGATTTCCAAAGACCTTACCTTCGCA 1081
|| || ||.|||.||....|||.|.|||||||||..|||.||..|.|||.
BL03976___mae 1033 AC-GACAGGCATGGATCAAATCATGGATTTCCAAGAACCGTATTTGCGCG 1081
BSNT_05656___ 1082 ATGCGGATGAAGTGAAAGACTGGAAGCGTGATGAAAAAGGTCAAATTCCA 1131
||.||||.|||||||||||.|||||.||..|||||||.||..|.|||.|.
BL03976___mae 1082 ATACGGAAGAAGTGAAAGATTGGAAACGCAATGAAAAGGGAGAGATTTCC 1131
BSNT_05656___ 1132 TTCGATGAAGTTGTTCGTCAAGCGAAACCAACAATCTTGATTGGTACTTC 1181
||.||.|||||..|.|||||||.|||.||.||.|||.||||||||||.||
BL03976___mae 1132 TTTGAGGAAGTCATCCGTCAAGTGAAGCCTACGATCCTGATTGGTACATC 1181
BSNT_05656___ 1182 AGGGGTTTCAGGTGCATTCACAGAGGAAATTGTAAAAGAAATGGCATCTC 1231
|||.|||.|.||.||.||.|..||.|||||..|.|||||.|||||..|||
BL03976___mae 1182 AGGTGTTGCCGGCGCCTTTAGTGAAGAAATCATCAAAGAGATGGCGGCTC 1231
BSNT_05656___ 1232 ACGTA--GACCGTCCGGTTATCATGCCGATGTCTAACCCGACTCACCTTG 1279
| || ||.|||||.||.||..||||||||||.||.|||||.||.||.|
BL03976___mae 1232 A--TACTGAGCGTCCTGTGATTCTGCCGATGTCAAATCCGACACATCTGG 1279
BSNT_05656___ 1280 CTGAAGCTGTTCCTGAAGATCTGTTCAAATGGACTGACGGAAAAGTGCTT 1329
|.|||||||||||||||||..|||||||||||||.||||||||||.||||
BL03976___mae 1280 CCGAAGCTGTTCCTGAAGACTTGTTCAAATGGACGGACGGAAAAGCGCTT 1329
BSNT_05656___ 1330 ATTGCAACAGGAAGCCCATTTGACAATGTAGAATACAACGGTGTTTCTTA 1379
.|.||.||.||||||||.|||||...|||.||.|||||.||.||.....|
BL03976___mae 1330 GTGGCGACGGGAAGCCCGTTTGAAGCTGTTGAGTACAATGGCGTGAAACA 1379
BSNT_05656___ 1380 TGAAATCGGACAATCTAACAACGCATTCGCGTTCCCTGGTCTTGGACTTG 1429
.||||||||||||||.||.|||||.||.|..||||||||..|.||.||.|
BL03976___mae 1380 CGAAATCGGACAATCCAATAACGCTTTTGTATTCCCTGGATTAGGCCTGG 1429
BSNT_05656___ 1430 GTTCAATTGTAGCTGAAGCGCGTATCATTAC-ACCTGCTATGTTTGCTGC 1478
||.||||.||.||..|||||....||||.|| |.|.|| |||||||||||
BL03976___mae 1430 GTACAATCGTTGCGAAAGCGAAAGTCATCACAAACGGC-ATGTTTGCTGC 1478
BSNT_05656___ 1479 AACTGCTGATGCGATTGCTGAA-ATGGTTGATTTTGAAACACCTGGAGCA 1527
|.||||..|.|||.|.|| ||| |||||.|||..|||||..||.||.|||
BL03976___mae 1479 ATCTGCCAACGCGGTCGC-GAACATGGTGGATCATGAAAAGCCGGGTGCA 1527
BSNT_05656___ 1528 GGATTGCTTCCAAGCATTGATAAGCTTCAAGAGGTTTCTATCCAAGTTGC 1577
||..|.||.||.|..||.||..|.||.|||||.||.||..|.|||||.||
BL03976___mae 1528 GGTCTTCTGCCGAAAATCGACGACCTGCAAGACGTATCCGTTCAAGTGGC 1577
BSNT_05656___ 1578 GATTGCCGTTGCTGAAGCAGCAATTAAAGACGGCGTGG--CAAATCGTCA 1625
|||.|.|||||...||||.||.|||||||||||||||| |||.| |||
BL03976___mae 1578 GATCGACGTTGTAAAAGCTGCCATTAAAGACGGCGTGGCCCAAGT--TCA 1625
BSNT_05656___ 1626 GCCTGAAGATGT-GAAACAAGCGGTACTTGATGCAATGTGGACACCTGAA 1674
|||||||||||| |||| |.||.||.|..||.||.||||||...||.||.
BL03976___mae 1626 GCCTGAAGATGTCGAAA-AGGCTGTCCGCGAAGCCATGTGGCGTCCGGAG 1674
BSNT_05656___ 1675 TACAAAAAAGTCATCGCGAAATAA------ 1698
||.||||.|.|..|.||.|||.||
BL03976___mae 1675 TATAAAACAATTGTTGCAAAACAAGACTAA 1704
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