Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02120 and BL03834
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:36
# Commandline: needle
# -asequence dna-align/BSNT_02120.1.5803.seq
# -bsequence dna-align/BL03834___xkdC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02120-BL03834___xkdC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02120-BL03834___xkdC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02120
# 2: BL03834___xkdC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 839
# Identity: 427/839 (50.9%)
# Similarity: 427/839 (50.9%)
# Gaps: 253/839 (30.2%)
# Score: 1230.5
#
#
#=======================================
BSNT_02120 0 -------------------------------------------------- 0
BL03834___xkd 1 ATGCCCAAAAGAACAATCGAAGAGGTCATGGACGAACTGAGAAACAGGAG 50
BSNT_02120 0 -------------------------------------------------- 0
BL03834___xkd 51 CCGTCAATCACAGGGGGGCAAACCGGAAGAATCCGCCGCAAAACGGTATG 100
BSNT_02120 0 -------------------------------------------------- 0
BL03834___xkd 101 ACTGTCCGAAGTGCAAAGATGAACTCGGATTTATCGAACGGCGCGGAACG 150
BSNT_02120 1 ATGGCAGAACGGAAAGTGAAGCGGCTGCTG-----GGTGCA--------- 36
||||.||.|.||..| |.|.|||.||||.| ||.|||
BL03834___xkd 151 ATGGAAGTATGGGTA-TCATGCGTCTGCCGCGAATGGCGCAAAGCGCAAA 199
BSNT_02120 37 --------------AGTGAGATTACC-CACGCTTTCAGA----CAGCTCG 67
||.||.||.||| .||..|||.|.| .|.||..
BL03834___xkd 200 AGCTGTTGAAGACGAGCGAAATCACCGAACAATTTAAAAACTTAAACTTT 249
BSNT_02120 68 GC----TTCAAGGAATTCCGCACGGAGGGAAAGCCGCAGGCCATAAAAGA 113
|| |||||| |||||.|||||||..||..|..|||||||
BL03834___xkd 250 GCTCAATTCAAG---------ACGGAAGGAAAGCATCAATCTGTAAAAGA 290
BSNT_02120 114 CGCATTTGAGTGTATAAAAGAGTATGTTGCC---GATTATGAACAA---- 156
.||.|.|||.|| .||| ||.||||.||||
BL03834___xkd 291 GGCGTATGAATG---------------CGCCGTTGAATATGTACAAGCTT 325
BSNT_02120 157 --------ATCAAGGATTGCCGAAAAAACAGCATTGCCCTTTTAGGACAG 198
||..||||..||||.|.|||||||||.||.||.||.||||..
BL03834___xkd 326 ACCGGGACATTCAGGAAAGCCGCAGAAACAGCATCGCGCTCTTGGGACGA 375
BSNT_02120 199 CCCGGATCAGGGAAAACACACCTTT--TGACTGCCGCTGCCAACGAATTA 246
|||||.||||||||.||.|| ||| ||||.||.||.|||||.||..|.
BL03834___xkd 376 CCCGGTTCAGGGAAGACTCA--TTTGCTGACGGCTGCCGCCAATGAGCTG 423
BSNT_02120 247 ATGA-GAACATGC--TATGTGCCTGTCATTTATTTTCCGTTCGTGGAAGG 293
|||| ||| || |.|||.||.|||.|.|||||||||||.||.|||||
BL03834___xkd 424 ATGAGGAA---GCTTTTTGTACCCGTCCTGTATTTTCCGTTTGTCGAAGG 470
BSNT_02120 294 CTTTACTGATCTGAAAAATGATTTTGC---CCTATTAGAAGCGAAGCTGA 340
.||.|.||||.|.|||.|.||.|||.| .|| |.|||| .|||||||
BL03834___xkd 471 ATTCAATGATTTAAAACAGGACTTTTCGTTGCT-TGAGAA--TAAGCTGA 517
BSNT_02120 341 ACCGGATGAAGCAGGCGGATGTGCTGTTCATAGATGACCTGTTTAAACCG 390
|||||||||||||.|..||.||||||||..|.||||||||||||||.|||
BL03834___xkd 518 ACCGGATGAAGCAAGTCGAGGTGCTGTTTCTTGATGACCTGTTTAAGCCG 567
BSNT_02120 391 GTTAACGGCAAACCCCGCGCTACAGATTGGCAATTAGAGCAAATGTATTC 440
||....||||..||.||.||.||.||.|||||..|.||.||.|..|||.|
BL03834___xkd 568 GTGGCAGGCAGGCCGCGGGCAACGGAATGGCAGATCGAACAGACATATGC 617
BSNT_02120 441 GGTACTCAACTATCGCTACTTAAATCATAAACCGATTTTGCTTTCGAGCG 490
.||..||||.||..|.||.||.||.|||||.|||||..||||.||.||||
BL03834___xkd 618 CGTCGTCAATTACAGGTATTTGAACCATAAGCCGATCATGCTGTCCAGCG 667
BSNT_02120 491 AGCTGACAATTGAAGCACTTGTACGGGTCGATGAAGCGCTCGGCACGAGA 540
||||.|...||||||.|.||||..|..|.||.|||||||||||.|||||.
BL03834___xkd 668 AGCTAAGCGTTGAAGAAATTGTCAGCATAGACGAAGCGCTCGGAACGAGG 717
BSNT_02120 541 ATCTATGAGATGTGCAGTGACTATTTAGTGATTATCAA-AGGAGCAGCCT 589
.|....||.||||||.|.||||.|.|.||..|..|.|| .||||| .|.|
BL03834___xkd 718 CTGGTCGAAATGTGCGGGGACTTTCTCGTCGTCCTGAACGGGAGC-TCTT 766
BSNT_02120 590 ACGAGC-TTAACCATAGATTGGAGGG---CGTCAGATAA 624
.|| || |.||.||||||.||||||| .||..||
BL03834___xkd 767 TCG-GCATCAATCATAGACTGGAGGGGATGGTTTGA--- 801
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