Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02180 and BL03773
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:41
# Commandline: needle
# -asequence dna-align/BSNT_02180___proG.1.5803.seq
# -bsequence dna-align/BL03773___proG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02180___proG-BL03773___proG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02180___proG-BL03773___proG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02180___proG
# 2: BL03773___proG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 916
# Identity: 544/916 (59.4%)
# Similarity: 544/916 (59.4%)
# Gaps: 200/916 (21.8%)
# Score: 1495.5
#
#
#=======================================
BSNT_02180___ 1 ATGGAAC-AGATTGGATTGATTGGATATGGCAGCATGGCGGATATGATCG 49
|.|||| ||||||||||.||.|||||.||.||||||||..|.|||||.|
BL03773___pro 1 -TTGAACAAGATTGGATTTATCGGATACGGAAGCATGGCACAGATGATTG 49
BSNT_02180___ 50 CCAGACAGCTGTTGAAAC------AT-----GAACAAATAAAAGA-GA-A 86
| |.|||||| || || ||||.|..|| || |
BL03773___pro 50 C---------GGTGAAACTGCTAGATCAGGGGA--AAATCAGGGATGACA 88
BSNT_02180___ 87 TG---------AGCT------ATTTATTGAGACGAGAACAAAGGGGGAGC 121
|| |||| || ||||.||| ||..|.||||
BL03773___pro 89 TGGTGGTCGTCAGCTCAAGGAAT-------GACGGGAA-AACAGAGGAG- 129
BSNT_02180___ 122 GGCTGCGGGCACTCCTGTCAGA---TTATCCAAACGTATCGGCTG---AT 165
|||..|.| ||||||.|| |.|||.||| ||
BL03773___pro 130 --------------CTGAAAAAGCTTTATCCGAA--TGTCGCCTGTCAAT 163
BSNT_02180___ 166 CCGTTGGAGAATTGGGCAAATACGTGCCAATTGATTTTGATATGCGTCCC 215
|.|.||..||..|.|.||||.| ||||....||||.||.||.||.||.||
BL03773___pro 164 CAGCTGATGAGCTCGCCAAACA-GTGCGGCCTGATCTTCATCTGTGTACC 212
BSNT_02180___ 216 GCCGCTCCATGTC-------------ATCGAAACAATGC-GCCG--TCTG 249
|||| |||.| .|.||||.|||.| |||| |||.
BL03773___pro 213 GCCG----ATGGCGGTAAAAGAAACGCTTGAAAAAATACAGCCGTTTCTT 258
BSNT_02180___ 250 CACCCGTATGTGAACAGAAATACTCACATCGTATCCATAGCTGCCGGTGT 299
||...|.|||| .||||||||.||.||.||.||.||.||
BL03773___pro 259 CAGGAGGATGT------------CCACATCGTTTCGATTGCCGCGGGGGT 296
BSNT_02180___ 300 GCCGCT---GCGTCTTTTGGA--GGCAGAAACAGAAGCGGGTATCTCACG 344
...||| .||.|||...|| || |.||||||..|..|.|||
BL03773___pro 297 CGAGCTTGACCGGCTTCACGACTGG-------ACAAGCGGACAGGTGACG 339
BSNT_02180___ 345 TGTTATTCCTGCCATTACGTCCGA-------AGCAGAAGCTGGCATC--- 384
.|.|| ||| ||||| |.|.|||||.||.|||
BL03773___pro 340 AGATA-------CAT----TCCGACACTCACATCTGAAGCCGGGATCGGC 378
BSNT_02180___ 385 ---TCACTTGTCGTTCACAGTGAAGCACTGGCT-GCAGA----GAAAAAA 426
||.|||||.||.|||.|.| ||| ||.| ||.|| ||.||||
BL03773___pro 379 GTTTCGCTTGTTGTCCACGGCG-AGC---GGGTCGCTGAGGCGGACAAAA 424
BSNT_02180___ 427 GAACGTCTGAATGAATTGTTATCGGTTTTCAGCCGTGTTCGAG--AAATC 474
| .||.|||.|.||| |||| ||||.||| ||| || .|.||
BL03773___pro 425 G-CCGGCTGGAAGAA----TATC---TTTCCGCC---TTC-AGCACAGTC 462
BSNT_02180___ 475 AAAGA-ATCGAATG---------TTGATGCGGCCAGCAATTTAACGAGCT 514
|||.| ||| |||| ||||.||.||.|||||||||||.||||
BL03773___pro 463 AAACAGATC-AATGAGAGAGATATTGACGCTGCGAGCAATTTAACAAGCT 511
BSNT_02180___ 515 CGGCACCGGGATTCATAGCCGCAATCTTTGAAGAGCTGGCACTGTCTGCC 564
|..|||||||.|||||.||..|.||.||||||||..|.||.|...|.|||
BL03773___pro 512 CTTCACCGGGGTTCATCGCTTCGATTTTTGAAGAATTTGCTCAAGCCGCC 561
BSNT_02180___ 565 GTCAGAAACAGCAGCCTGTCCAAAGAAGAAGCCTTTGATTTTCTGATTCA 614
|||||||||||||||||..|.|||||||||||.|||.|.|||||||||||
BL03773___pro 562 GTCAGAAACAGCAGCCTCACGAAAGAAGAAGCGTTTCAATTTCTGATTCA 611
BSNT_02180___ 615 TTC---GCTATACGGAACTGGCAAGATGCTGATCGAAAAAAATATGTCTT 661
||| ||| .|||||.||||||.||.|.||.||||||.|.|||.|.|
BL03773___pro 612 TTCATTGCT---GGGAACAGGCAAGCTGTTAATGGAAAAAGACATGACGT 658
BSNT_02180___ 662 TCGAGGAGACGCTGGAACGTGTTGCAACCAAAGGCGGAATAACGGGAGAG 711
|.|...|.|||||.||.||.||.||.||.||||||||.|||||.|.|||.
BL03773___pro 659 TTGCTCAAACGCTTGATCGGGTGGCGACAAAAGGCGGCATAACCGCAGAA 708
BSNT_02180___ 712 GGAGCTGAGGTGATACACGCCTCTGTGCCGGACGTTTTTGATGAGGTGTT 761
||.||.||.||.||.||.|...|..|||||||.||.|||||.|||.||||
BL03773___pro 709 GGTGCGGAAGTCATTCAAGATGCCATGCCGGAAGTCTTTGACGAGCTGTT 758
BSNT_02180___ 762 TGAAAGAACCCTGAAAAAATATGAACTGCTTACAGA--------ACAGGT 803
||..|||||..||||.|||||||||.|..|.|.||| .|.||
BL03773___pro 759 TGCCAGAACGATGAAGAAATATGAAGTCATCAAAGACGCTGTCCGCCGG- 807
BSNT_02180___ 804 TGGTAAACAGACATGA 819
||| |||
BL03773___pro 808 -------CAG---TGA 813
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