Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03756 and BL03683
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:47
# Commandline: needle
# -asequence dna-align/BSNT_03756___cccA.1.5803.seq
# -bsequence dna-align/BL03683___cccA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03756___cccA-BL03683___cccA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03756___cccA-BL03683___cccA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03756___cccA
# 2: BL03683___cccA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 365
# Identity: 261/365 (71.5%)
# Similarity: 261/365 (71.5%)
# Gaps: 7/365 ( 1.9%)
# Score: 856.5
#
#
#=======================================
BSNT_03756___ 1 ATGAAATGGAACCCGCTTATTCCATTTTTGATGATCGCTGTTTTAGGAAT 50
|||||..|.||.||..|.||.|||||||||.|.|||||..||.|.||.||
BL03683___ccc 1 ATGAACCGCAATCCATTGATACCATTTTTGTTAATCGCCATTATGGGCAT 50
BSNT_03756___ 51 TGGTCTAACTTTCTTTTTATCAGTAAAAGGACTTGATGACTCTCGGGAGA 100
.||.||...|||..|.|||||..|||||||.|||.|||||.|....||.|
BL03683___ccc 51 AGGACTGGTTTTTATCTTATCTATAAAAGGCCTTTATGACGCAAAAGAAA 100
BSNT_03756___ 101 TTGCAAGCGGAGGAGAAAGCAAATCTGCTGAA-AAGAAAGATGCAAACGC 149
|||||.|||.||| ||| .|||.|.|||.|| ||||.| |.||..|.||
BL03683___ccc 101 TTGCAGGCGAAGG-GAA--TAAAACAGCTCAAGAAGACA-AAGCCGATGC 146
BSNT_03756___ 150 TTCACCAGAAGAAATTTACAAGGCAAACTGCATCGCATGCCACGGTGAAA 199
|||.||.||||||||||||||.||.|||||..|..|.||||||||.||.|
BL03683___ccc 147 TTCGCCTGAAGAAATTTACAAAGCGAACTGTGTAACCTGCCACGGCGAGA 196
BSNT_03756___ 200 ATTATGAAGGCGTTTCGGGTCC-GAGCTTAAAGGGTGTAGGGGATAAGAA 248
||||||||||.||.||.||.|| .|.||.||| ||.||.|||||...||.
BL03683___ccc 197 ATTATGAAGGTGTGTCAGGCCCTAAACTGAAA-GGCGTCGGGGACCGGAT 245
BSNT_03756___ 249 AGATGTCGCTGAAATTAAAACAAAGATCGAAAAAGGCGGTAATGGAATGC 298
.|||...|.||..||||||..||||||.|||||||||||.||.|||||||
BL03683___ccc 246 GGATACAGGTGCGATTAAAGAAAAGATTGAAAAAGGCGGCAACGGAATGC 295
BSNT_03756___ 299 CTTCCGGTCTTGTTCCGGCCGATAAGCTGGATGATATGGCAGAGTGGGTA 348
|....||.||.||.|||||.||.|||||.|||||||||||..|.|||||.
BL03683___ccc 296 CGGGAGGACTGGTCCCGGCGGAAAAGCTTGATGATATGGCCAAATGGGTG 345
BSNT_03756___ 349 TCAAAAATTAAATAA 363
|||.|.||||||||.
BL03683___ccc 346 TCAGAGATTAAATAG 360
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