Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03775 and BL03671
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:49
# Commandline: needle
# -asequence dna-align/BSNT_03775___yqfG.1.5803.seq
# -bsequence dna-align/BL03671.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03775___yqfG-BL03671.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03775___yqfG-BL03671.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03775___yqfG
# 2: BL03671
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 490
# Identity: 347/490 (70.8%)
# Similarity: 347/490 (70.8%)
# Gaps: 29/490 ( 5.9%)
# Score: 1179.0
#
#
#=======================================
BSNT_03775___ 1 ATGAGTTTACTGATTGATATCGTTGATGAAACAGGAAGCGTCTCAGAAGA 50
|||||||||.|..|.||||||...||.||.||.|||.|||||.|.|||||
BL03671 1 ATGAGTTTAATTCTAGATATCACAGACGAGACCGGACGCGTCCCTGAAGA 50
BSNT_03775___ 51 GC----TGCTCAAAGAAGTAGAAAATCTGCTTCAATTTGCCGCTGAGCGT 96
.| |||| |||.|.|||||.||.||||||||.||.||.|.|...
BL03671 51 CCGGCTTGCT----GAAATTGAAAAGCTTCTTCAATTCGCAGCGGCGGAG 96
BSNT_03775___ 97 GAAGGCGTTCAAGACCAGGCTGAAGTTTCTGTCACGATTGTTTCCAATGA 146
||||||||...||||...||.|||||.||.||.|||||.||...||||||
BL03671 97 GAAGGCGTCGCAGACGGCGCCGAAGTCTCGGTTACGATCGTCAACAATGA 146
BSNT_03775___ 147 TGACATACATCAGATTAACAAAGAATACCGGGGAAAGGATGCTCCGACAG 196
.||.|||||..|.||.||||||||.|||.|.||.||.|||...|||||.|
BL03671 147 AGAGATACAAAAAATCAACAAAGAGTACAGAGGCAAAGATTACCCGACTG 196
BSNT_03775___ 197 ATGTCATCTCATTTGCTCTTGAAGAAGAGGGAGAAGGCGAGATCGAAATC 246
|.|||||.||||||||.||.||||||||.||.|||||.|||.|.|||||.
BL03671 197 ACGTCATTTCATTTGCCCTCGAAGAAGACGGCGAAGGAGAGGTTGAAATT 246
BSNT_03775___ 247 GTGGGCGCCGAAATGCCTCCGGTTTTAGGTGATATTATCATCAGTGCCGA 296
.|.|||||.||.|||||.||.|||.|.||.|||||.||||||||.|.|||
BL03671 247 ATCGGCGCTGATATGCCGCCCGTTCTCGGAGATATCATCATCAGCGTCGA 296
BSNT_03775___ 297 TCGCACAA-----GAGAGCAGGCAGAGGAGTATAATCATTCTTTTAAAAG 341
| || |.||.|||||.||.||.||....|||||..|.|..||
BL03671 297 T-----AAAGCCCGGGAACAGGCCGAAGAATACGGACATTCACTGATGAG 341
BSNT_03775___ 342 AGAGCTCGGATTTCTAGCTGTACACGGATTTCTGCACCTTTTAGGATATG 391
.|||||.||.|||||..|.||.|||||.|||.|||||||..|.||.||||
BL03671 342 GGAGCTGGGTTTTCTGACGGTTCACGGCTTTTTGCACCTCCTCGGCTATG 391
BSNT_03775___ 392 ACCATATGACGAAAGAGGAAGAAG---AGGAGATGTTTACTAAGCAAAAG 438
|||||||||| ||||||||||| |.||||||||.||||||||||||
BL03671 392 ACCATATGAC---AGAGGAAGAAGAAAAAGAGATGTTCACTAAGCAAAAG 438
BSNT_03775___ 439 GAATTGCTGGA-CGCTTATGGACTCAAAAGA---TCATAG 474
|||.|..||.| || .|||||.|||..|||| |||||.
BL03671 439 GAAATTTTGAATCG-ATATGGGCTCTCAAGATCCTCATAA 477
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