Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02311 and BL03644
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:50
# Commandline: needle
# -asequence dna-align/BSNT_02311.1.5803.seq
# -bsequence dna-align/BL03644___ykvS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02311-BL03644___ykvS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02311-BL03644___ykvS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02311
# 2: BL03644___ykvS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 190
# Identity: 146/190 (76.8%)
# Similarity: 146/190 (76.8%)
# Gaps: 5/190 ( 2.6%)
# Score: 543.0
#
#
#=======================================
BSNT_02311 1 GTGAAAATCGCTAAGGTTGGGAATGTCATTGAATTTAAAAACGGATTAAC 50
.|||||||.||.||.||.|||||.|||||.|||||||||||||||.|.||
BL03644___ykv 1 TTGAAAATTGCAAAAGTCGGGAACGTCATCGAATTTAAAAACGGACTCAC 50
BSNT_02311 51 CGGTGTTGTTGAAAAAGTAAATGAGAATTCTGTTATCGTTGATGTGACGA 100
|||..|.||.|||||||||||.||.||.|||||.|||||.|||||.||||
BL03644___ykv 51 CGGAATCGTAGAAAAAGTAAACGAAAACTCTGTGATCGTCGATGTCACGA 100
BSNT_02311 101 TCATGGATAACTATCGGGATCTT-GAGTTAGATTCATTGACAGTTGTTAA 149
|.|||||.|||||..|.|| ||| ||..|.||.||.||.||.||.||.||
BL03644___ykv 101 TTATGGAAAACTACAGAGA-CTTGGAACTGGACTCCTTAACCGTCGTCAA 149
BSNT_02311 150 TCATAAAAATTATAAGATCATCAGAGACTCC---TATTAA 186
|||||||||.|||||.||.||.|.||||||| .|||||
BL03644___ykv 150 TCATAAAAACTATAAAATTATTAAAGACTCCCTGCATTAA 189
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