Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01924 and BL03340
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:27
# Commandline: needle
# -asequence dna-align/BSNT_01924___yjbE.1.5803.seq
# -bsequence dna-align/BL03340___yjbE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01924___yjbE-BL03340___yjbE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01924___yjbE-BL03340___yjbE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01924___yjbE
# 2: BL03340___yjbE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 681
# Identity: 470/681 (69.0%)
# Similarity: 470/681 (69.0%)
# Gaps: 42/681 ( 6.2%)
# Score: 1482.5
#
#
#=======================================
BSNT_01924___ 1 ATGGAGCATGACTAT-CTGATTTCTCTGCTTGTCATTGTTGGGATTGACC 49
|||||.||.|| ||| |||||.||..|.|||||.||..|.||.||.||.|
BL03340___yjb 1 ATGGAACACGA-TATACTGATGTCGTTCCTTGTGATCATCGGAATCGATC 49
BSNT_01924___ 50 TGATCCTCGGCGGAGATAATGCGGTTGTCATTGCCATGGCCAGCAGACAT 99
|.||.||.|||||.||.||.||.|||||.|||||.|||||.|||.|.|||
BL03340___yjb 50 TCATACTTGGCGGCGACAACGCTGTTGTGATTGCAATGGCAAGCCGTCAT 99
BSNT_01924___ 100 TTGCCGGACAAGCAAAG--AAAGCAAGCCATTATTCTCGGAACATTTATT 147
|||||...|..|||||| ||| ||||.||.||..||||.|||||.||.
BL03340___yjb 100 TTGCCTCCCCGGCAAAGGCAAA--AAGCGATCATCATCGGCACATTGATC 147
BSNT_01924___ 148 GCCGT--TGCCATGAGAATCGGATTAACAAGTGCAGCTGTATATCTTTT- 194
|||.| || ||||||||||...||||.|..|||||.|||||.||..|
BL03340___yjb 148 GCCATCATG--ATGAGAATCGCGCTAACCATGGCAGCAGTATACCTGCTC 195
BSNT_01924___ 195 ---GAACATTCCGTTCT-TGCAGTGCGCCGGCGGAATTTTCCTGCTGTAT 240
| |||| ||.| ||||.|....|||.|||||.|||||..||||.
BL03340___yjb 196 GCGG----TTCC-TTATCTGCAATTTATCGGAGGAATCTTCCTTTTGTAC 240
BSNT_01924___ 241 TTAGGATATCAGCTGCTGATTGAAAAAAAAGACACGAAACACATTAAAAG 290
||||||||||||||.||||||||.||||||||..|..|.||..|.|||.|
BL03340___yjb 241 TTAGGATATCAGCTTCTGATTGAGAAAAAAGATGCCCAGCATGTCAAAGG 290
BSNT_01924___ 291 CAGCACCTCCCTGTGGAGAGCGATACGAACGATTGTGCTTGCAGATCTCT 340
|.|.||.||..|.|..|..|||||.||.|..||.|||.||||.||..|.|
BL03340___yjb 291 CGGGACATCTTTATTTAAGGCGATCCGCATCATCGTGATTGCCGACTTGT 340
BSNT_01924___ 341 TTATGTCGCTGGACAACGTCATCGCAGTTGCGGGAGCTTCACACGG---- 386
|.|||||.||.||.||.||.||.||.||.||.|||||.||||||||
BL03340___yjb 341 TCATGTCCCTTGATAATGTGATTGCGGTCGCCGGAGCCTCACACGGACGC 390
BSNT_01924___ 387 -TGAGTTTTCT-CTCGTTGTTATAGGTTTG-TGTGTATCGGTTCCGGTTA 433
||| | ||.||.|||.|.||..|| || ||.||.||||||||.|
BL03340___yjb 391 CTGA------TGCTTGTCGTTGTCGGCCTGATG-GTCTCCGTTCCGGTCA 433
BSNT_01924___ 434 TTATTTGGGGCAGCAAACTCATCCATATTGCACTAGAGAAAATACCGCTT 483
|.|||||||||||||..||.||.||....||.||.|..|||.|.|||||.
BL03340___yjb 434 TCATTTGGGGCAGCAGGCTGATTCAAGCGGCTCTTGCCAAATTTCCGCTC 483
BSNT_01924___ 484 CTGATTTACGCGGGAAGCGGGCTGCTTGCTTATACTGGTGGAGAAATGAT 533
.|.||.|||||.||||||||.|||||.|||||||||||.||.||||||||
BL03340___yjb 484 TTAATATACGCAGGAAGCGGACTGCTGGCTTATACTGGCGGCGAAATGAT 533
BSNT_01924___ 534 TGTCAGAGACAAAAAGCTGTCTCTTTTTATGGCGCAGCACGGCACAGTTG 583
.|||||.||..|..||.|||||...|||||||||||||||.||||..|.|
BL03340___yjb 534 CGTCAGGGAGCAGGAGTTGTCTTCCTTTATGGCGCAGCACAGCACCCTCG 583
BSNT_01924___ 584 AAACGCTCCTCCCCATTTTGACTGTTGCGTTTGTTATCCTTGCGAGCATT 633
|||.|||.||.|||.|..|.||.|||...|||||.||..|.||.||.|||
BL03340___yjb 584 AAATGCTGCTGCCCGTCCTTACGGTTATTTTTGTGATTTTAGCCAGTATT 633
BSNT_01924___ 634 TATTACCAGCAG----GTTGAAAA--ATAA- 657
|||||..|.||| | |||||| ||.|
BL03340___yjb 634 TATTATGAACAGACGAG-TGAAAAGCATTAA 663
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