Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00186 and BL03266
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:50
# Commandline: needle
# -asequence dna-align/BSNT_00186___ispF.1.5803.seq
# -bsequence dna-align/BL03266___ispF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00186___ispF-BL03266___ispF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00186___ispF-BL03266___ispF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00186___ispF
# 2: BL03266___ispF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 477
# Identity: 356/477 (74.6%)
# Similarity: 356/477 (74.6%)
# Gaps: 0/477 ( 0.0%)
# Score: 1296.0
#
#
#=======================================
BSNT_00186___ 1 ATGTTTAGAATTGGACAAGGATTTGATGTGCATCAATTAGTGGAGGGCCG 50
|||||||||||.||.|||||||||||.||.||||||.|||||||.|||.|
BL03266___isp 1 ATGTTTAGAATAGGCCAAGGATTTGACGTCCATCAACTAGTGGAAGGCAG 50
BSNT_00186___ 51 TCCTCTCATTATTGGCGGAATTGAAATCCCGTACGAAAAAGGGCTGCTTG 100
.||.|||||.||.||.||||||...||.||.|||||||||||.||.||.|
BL03266___isp 51 GCCGCTCATAATCGGGGGAATTACGATTCCTTACGAAAAAGGCCTTCTCG 100
BSNT_00186___ 101 GCCATTCTGATGCAGACGTATTGCTGCATACTGTCGCTGACGCCTGCCTG 150
|.|||||.||||||||.||..|..||||.||..|.||.||.||.||.||.
BL03266___isp 101 GACATTCAGATGCAGATGTGCTTTTGCACACGATTGCGGATGCATGTCTC 150
BSNT_00186___ 151 GGAGCTGTGGGTGAAGGAGACATCGGCAAGCATTTTCCTGACACAGATCC 200
||.||.||.||.||.||.||.|||||.||.||.|||||.||.||.|||||
BL03266___isp 151 GGTGCCGTCGGCGAGGGCGATATCGGAAAACACTTTCCGGATACCGATCC 200
BSNT_00186___ 201 CGAGTTCAAGGACGCAGATTCTTTCAAATTACTTCAGCATGTCTGGGGAA 250
.||.|||||.||.||.||.||.||||||.|.||||..||.||||||...|
BL03266___isp 201 TGAATTCAAAGATGCCGACTCCTTCAAACTCCTTCGCCACGTCTGGATGA 250
BSNT_00186___ 251 TCGTGAAACAGAAGGGGTATGTCCTTGGGAACATTGATTGCACCATCATA 300
|||||||..|.||.||.|||...||.||||||.|.|||||.||.|||||.
BL03266___isp 251 TCGTGAAGGAAAAAGGCTATACGCTAGGGAACCTGGATTGTACAATCATC 300
BSNT_00186___ 301 GCGCAAAAGCCGAAGATGCTGCCGTACATAGAAGATATGAGAAAAAGAAT 350
||.||||||||.||.|||..||||||.||.|||||.||||||...|||||
BL03266___isp 301 GCCCAAAAGCCTAAAATGGCGCCGTATATCGAAGACATGAGAGCCAGAAT 350
BSNT_00186___ 351 TGCTGAAGGCCTTGAGGCAGATGTTTCTCAAGTAAATGTAAAAGCAACAA 400
|||.|||||.||.|||||.||..||||.|||.|.||.||||||||.||.|
BL03266___isp 351 TGCCGAAGGGCTAGAGGCGGAAATTTCCCAAATTAACGTAAAAGCGACCA 400
BSNT_00186___ 401 CGACAGAAAAGCTTGGATTTACAGGCCGGGCGGAAGGAATAGCGGCTCAG 450
|.||.||||||||.||||||||.||..|.||.||||||||.||.||.|||
BL03266___isp 401 CAACCGAAAAGCTCGGATTTACGGGAAGAGCCGAAGGAATCGCCGCCCAG 450
BSNT_00186___ 451 GCGACAGTGCTGATACAAAAAGGCTAA 477
||..|.||.|||.|.|||||.|..|||
BL03266___isp 451 GCTTCCGTTCTGCTCCAAAAGGTATAA 477
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