Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03924 and BL03125
See
Amino acid alignment /
Visit
BSNT_03924 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:56
# Commandline: needle
# -asequence dna-align/BSNT_03924___levR.1.5803.seq
# -bsequence dna-align/BL03125___levR.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03924___levR-BL03125___levR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03924___levR-BL03125___levR.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03924___levR
# 2: BL03125___levR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2838
# Identity: 2205/2838 (77.7%)
# Similarity: 2205/2838 (77.7%)
# Gaps: 81/2838 ( 2.9%)
# Score: 8510.5
#
#
#=======================================
BSNT_03924___ 1 GTGAGAAGAATAGATAAAATATACCATCAGCTCAAGCATAATTTTCATGA 50
.|||.|||||||||||||||.|||||||||||...|.|||||||||..||
BL03125___lev 1 ATGAAAAGAATAGATAAAATCTACCATCAGCTGCTGGATAATTTTCGCGA 50
BSNT_03924___ 51 -------TTCAACCTTAGATCATCTTTTAAAAATACAAGGGAATTCAGCA 93
.||| ||||.||||||||.||||||||||||||.||.
BL03125___lev 51 AAAGAATATCA-------ATCAGCTTTTAAAGATACAAGGGAATTCGGCT 93
BSNT_03924___ 94 AAGGAGATTGCCGAGCAGCTGAAAATGGAGCGGTCCAATGTCAGCTTTGA 143
||.||.||.||||.|||||||.||||||||||.|||||||||||||||||
BL03125___lev 94 AAAGAAATCGCCGGGCAGCTGCAAATGGAGCGTTCCAATGTCAGCTTTGA 143
BSNT_03924___ 144 ATTGAACAATCTCGTCCGGTCCAAAAAGGTCATCAAAATTAAAACGTTTC 193
|||.|||||||||||.|||.||||||||||.|||||.|||||||||||.|
BL03125___lev 144 ATTAAACAATCTCGTTCGGGCCAAAAAGGTGATCAAGATTAAAACGTTCC 193
BSNT_03924___ 194 CTGTAAGATACATCCCAGTCGAGATAGCAGAAAAATTATTCAACAAGAAA 243
|.||..|.||||||||.||.||.||.|..|||||..|.||.||||..|||
BL03125___lev 194 CCGTCCGCTACATCCCGGTGGAAATTGTTGAAAACGTCTTGAACATCAAA 243
BSNT_03924___ 244 TGGGATACAGAGATGATGGAAGTGAAAGACCTTCAGGCGTTTTCCGGAAA 293
|||.||.|||||.|||||||.||..||||.| |.|||||..|..|.||..
BL03125___lev 244 TGGAATTCAGAGTTGATGGAGGTTGAAGAAC-TGAGGCGGCTGGCTGACG 292
BSNT_03924___ 294 TTCAAAGCAAAATC---------ATCAACACATTTCCACGAATCCCCTAG 334
..|||| ||||.| || ||.|||.|..|||||||.|
BL03125___lev 293 GCCAAA--AAAAGCCGGCGCGCAAT------ATATCCGCCGATCCCCTCG 334
BSNT_03924___ 335 AGCTTATGATAGGGGCAAAAGGGAGTTTGAAGAAAGCGATCTCCCAGGCA 384
||||.|||||.|||||.||||||||.|||||.||.||.||.||.|||||.
BL03125___lev 335 AGCTCATGATCGGGGCTAAAGGGAGCTTGAAAAAGGCAATTTCTCAGGCG 384
BSNT_03924___ 385 AAAGCAGCTGTCTTTTATCCGCCGACCGGTCTGCATATGCTCCTCCTAGG 434
|||||.||.|||||||||||.|||..|||..||||||||||.||.||.||
BL03125___lev 385 AAAGCGGCAGTCTTTTATCCTCCGCACGGCTTGCATATGCTGCTGCTCGG 434
BSNT_03924___ 435 GCCGACTGGTTCCGGTAAATCCCTTTTTGCGAACCGAATTTACCAGTTTG 484
||||||.|||||.||.|||||.||.||||||||.||.||.||||||||.|
BL03125___lev 435 GCCGACGGGTTCGGGGAAATCGCTGTTTGCGAATCGGATCTACCAGTTCG 484
BSNT_03924___ 485 CCATTTACTCTGACATATTGAAGGCCGGCGCACCATTTATTACATTTAAC 534
||.||||.|||||||||||||||.|||...|.||.||.||.|||||.|||
BL03125___lev 485 CCGTTTATTCTGACATATTGAAGCCCGATTCCCCGTTCATCACATTCAAC 534
BSNT_03924___ 535 TGTGCAGACTACTACAACAATCCTCAATTATTGCTTTCTCAATTATTCGG 584
||||||||.|||||.|||||.||||||||||||||.||||||||.|||||
BL03125___lev 535 TGTGCAGATTACTATAACAACCCTCAATTATTGCTCTCTCAATTGTTCGG 584
BSNT_03924___ 585 ACACAAAAAAGGTTCATTTACAGGTGCTGCCGAGGATAAGGCGGGTTTAG 634
|||.||||||||.||.|||||||||||.|..||.||.||.||.||.||||
BL03125___lev 585 ACATAAAAAAGGGTCTTTTACAGGTGCGGGTGAAGACAAAGCAGGATTAG 634
BSNT_03924___ 635 TCGAACAGGCCAATGGGGGCATTCTTTTTATGGATGAAATCCACCGTCTC 684
||||.|||||..|.|||||||||||.|||||||||||||||||.||.|||
BL03125___lev 635 TCGAGCAGGCGGACGGGGGCATTCTGTTTATGGATGAAATCCATCGCCTC 684
BSNT_03924___ 685 CCTCCCGAGGGACAAGAAATGCTGTTTTATTTTATTGACAGCGGTTCTTA 734
||.||.|||||.||.|||||||||||||||||.||.||||||||..|.||
BL03125___lev 685 CCGCCGGAGGGGCAGGAAATGCTGTTTTATTTCATAGACAGCGGCACATA 734
BSNT_03924___ 735 TAACAGGCTTGGAGAATCTGAACATAAACGAACATCGAACGTATTGTTTA 784
.|||||||||||.|||.|.||.|||||||||||..|.||.||..||||||
BL03125___lev 735 CAACAGGCTTGGTGAAACAGAGCATAAACGAACGGCAAAAGTCCTGTTTA 784
BSNT_03924___ 785 TTTGTGCGACTACAGAAAATCCGAGTTCTGCACTATTGAAAACGTTTTTG 834
|.||||||||.||||||||||||||.||||||.|..||||.||.||||||
BL03125___lev 785 TCTGTGCGACAACAGAAAATCCGAGCTCTGCATTGCTGAAGACATTTTTG 834
BSNT_03924___ 835 CGAAGAATCCCAATGACCATACATATTCCTTCGCTTGAAGAACGATCACT 884
||.|||||.||.||||||.|||||||.||||||||..|.|||||.||.||
BL03125___lev 835 CGGAGAATTCCGATGACCGTACATATCCCTTCGCTCAATGAACGGTCCCT 884
BSNT_03924___ 885 TAAAGAAAGAGTGGATCTGACGACGTTTTTATTAGGGAAAGAAGCAGAGC 934
|..||||||||||||.|||||.|||||||||||.||||||||||||||||
BL03125___lev 885 TGGAGAAAGAGTGGAGCTGACAACGTTTTTATTGGGGAAAGAAGCAGAGC 934
BSNT_03924___ 935 GAATTAAGAAGAATCTGAGTGTGCATATCGATGTCTATAATGCGCTTATT 984
|.||.||.||.||..|.|.||||||.|||||||||||||||||.||.|||
BL03125___lev 935 GGATCAAAAAAAACTTAAATGTGCACATCGATGTCTATAATGCACTGATT 984
BSNT_03924___ 985 CACTCTGCGAAATTTGGGAATGTCGGACAGCTGAAATCAAATGTCCAGTT 1034
||.|||||.|||||.||.||||||||.|||||||||||||||||.|||.|
BL03125___lev 985 CATTCTGCAAAATTCGGAAATGTCGGGCAGCTGAAATCAAATGTACAGCT 1034
BSNT_03924___ 1035 AGTTTGCGCACACGGATTTTTGCATAACCTTGACAGAAATGAAGTTATTG 1084
.||.||.||.|||||.|||||..||||||||||||.|.|.||.|||.|||
BL03125___lev 1035 GGTCTGTGCGCACGGGTTTTTAAATAACCTTGACAAAGACGAGGTTGTTG 1084
BSNT_03924___ 1085 AACTGACTGTTCGCGATCTGCCTGATGAAATCAAGCAAGAATGGATGTCC 1134
|||||||.||.||.|||||.||.||.||.|||||..|.||.|||||||||
BL03125___lev 1085 AACTGACCGTCCGGGATCTTCCGGACGAGATCAAAGAGGACTGGATGTCC 1134
BSNT_03924___ 1135 AGCAGCAAAAACATGCAAAGAAGCAAAGCCATTTCTGAATATGTCAATAT 1184
|||||||||||.||..||.|.||||||...|||||||||||||||||.||
BL03125___lev 1135 AGCAGCAAAAATATTGAACGGAGCAAAATGATTTCTGAATATGTCAACAT 1184
BSNT_03924___ 1185 TACAACGATTATCTCTCCGATTGTAGAAGATGAAACAACAAAAATTGACG 1234
|||||||||.||||||||||||||.|||||||||.||||.|||||.||.|
BL03125___lev 1185 TACAACGATCATCTCTCCGATTGTGGAAGATGAAGCAACGAAAATCGATG 1234
BSNT_03924___ 1235 AAGACCTCTCATTTAACTTATATCATTTGATTGAGGAAAAAGTGAAAACG 1284
| |||.||||||||.||||||.|.||.||.|||||||.|||||..
BL03125___lev 1235 A------CTCCTTTAACTTGTATCATGTCATAGAAGAAAAAGCGAAAATC 1278
BSNT_03924___ 1285 CTTATGAAAGAAGGTTTATCCAAAAAGGATATTAACCAGTACATCTTGAC 1334
||.|..||||||||.|||.|.||||||.|.||.||.||.||.||.||.||
BL03125___lev 1279 CTCAATAAAGAAGGCTTAACAAAAAAGCAAATCAATCAATATATATTAAC 1328
BSNT_03924___ 1335 TGATGTCCATTTGCATGTCAGAAGTTTTTTTCATCATCAA--GCTTTTCA 1382
.|||.|.||||||||.||||||||.||||||.||||..|| || ||||
BL03125___lev 1329 GGATATTCATTTGCACGTCAGAAGCTTTTTTAATCAGAAAATGC--TTCA 1376
BSNT_03924___ 1383 AAAAGACAACCTGCTGACATTCGTTGAAGATGATGTGATTCAAATGACAA 1432
|||..|||...|.||.|.||||||||||||.||.||||||||.|||||.|
BL03125___lev 1377 AAACCACAGTTTACTCAAATTCGTTGAAGACGACGTGATTCAGATGACGA 1426
BSNT_03924___ 1433 AACAGTTAAAAGAAATAGCTGAACATGAGCTGGATTGCACATTTGACCGT 1482
||.|.|||||.|.|.|.||.|||||||||||.||.||||..||.||||||
BL03125___lev 1427 AAGAATTAAAGGGAGTCGCCGAACATGAGCTTGACTGCAAGTTCGACCGT 1476
BSNT_03924___ 1483 AAGTTTATTTATTTCTTGAGTATGCATATTGACGCATTTTTAAAGCGAGG 1532
||.||.||.||||||.||||.|||||.||.|.|||||||||||||||.||
BL03125___lev 1477 AAATTCATCTATTTCCTGAGCATGCACATCGCCGCATTTTTAAAGCGCGG 1526
BSNT_03924___ 1533 AAAGCAAATTGATGTTTTGAATACACAGGAGACAGATGAAATTCGTGATA 1582
||||||.||||||||.||.|||.|.|||||.|||||||||||..|.||.|
BL03125___lev 1527 AAAGCAGATTGATGTCTTAAATTCGCAGGAAACAGATGAAATCAGGGAAA 1576
BSNT_03924___ 1583 CCCATGTGAAAGAATATCG-GGTGGCGATGATTTTTAAAGATAAAATTCA 1631
|||||||||||||||| || |||.||..|.|||||.||||||||||||||
BL03125___lev 1577 CCCATGTGAAAGAATA-CGAGGTCGCACTCATTTTCAAAGATAAAATTCA 1625
BSNT_03924___ 1632 GGAATATTTTAAAGTGGCTATTCCTGAAATAGAAGTCATCTACTTAACGA 1681
.|.||||||.|||||..|..||||.|||||.||||||||||||||.||||
BL03125___lev 1626 AGCATATTTCAAAGTAACCGTTCCGGAAATCGAAGTCATCTACTTGACGA 1675
BSNT_03924___ 1682 TGTTAATTCATTCCATCAAATCGTTAAAGGAGAACAAAAGAGTC-GGTAT 1730
||.|.|||||.||.||.|||||.|..||.||.|||||||| |.| ||.||
BL03125___lev 1676 TGCTCATTCAGTCGATTAAATCATGGAAAGAAAACAAAAG-GACGGGCAT 1724
BSNT_03924___ 1731 TATCGTGGCTGCTCATGGAAACAGCACGGCGAGTTCAATGGTTGAAGTCG 1780
|.|||||||.||.|||||||||||||||||.||.||.|||||||||||.|
BL03125___lev 1725 TGTCGTGGCCGCCCATGGAAACAGCACGGCAAGCTCTATGGTTGAAGTAG 1774
BSNT_03924___ 1781 CGACAGAACTGCTGGGGAGTACGCCGATTGCAGCAGTTGACATGCCGCTT 1830
|.||.|||||||||||.||.||.|||||.||.||.|||||.|||||..|.
BL03125___lev 1775 CCACTGAACTGCTGGGAAGCACCCCGATCGCTGCGGTTGATATGCCTTTG 1824
BSNT_03924___ 1831 ACTGTTTCACCTTCGGACATTCTTGA-ATGCGTAGCAGAAAAAATGAAAC 1879
||.||||||||.||||| |.||.|.| .|||.||||.||.|||.||||.|
BL03125___lev 1825 ACCGTTTCACCCTCGGA-AATCGTCAGCTGCCTAGCGGAGAAAGTGAAGC 1873
BSNT_03924___ 1880 AGGTTGATGAAGGCGAAGGTGTTTTAATGCTGGTAGATATGGGGTCGCTT 1929
|||||||||||||.|||||.|||||||||||.||.||.|||||.||||||
BL03125___lev 1874 AGGTTGATGAAGGAGAAGGCGTTTTAATGCTTGTCGACATGGGATCGCTT 1923
BSNT_03924___ 1930 GCAATGCTGGAAAGCAGGCTGGAGGAAAAGACAGGCATCTCTATTAAAAC 1979
||.|||||||||||||||||.||..||.|.||.|||.|....||.|||||
BL03125___lev 1924 GCGATGCTGGAAAGCAGGCTTGAACAACAAACGGGCGTTAAAATAAAAAC 1973
BSNT_03924___ 1980 GATCAGCAATGTTACGACTTCAATGGTGCTGGATGCTGTCAGAAAGGTCA 2029
||||||||||||||||||.||.||||||||.|||||.|||.|.|||||.|
BL03125___lev 1974 GATCAGCAATGTTACGACATCTATGGTGCTCGATGCCGTCCGCAAGGTGA 2023
BSNT_03924___ 2030 ACTATTTGAATTTAAATTTGCATGCGATCTATCAATCGGTCACGAAGGAT 2079
|.|||||||||||.||||||||.||.|||||..|.|||||.||.||||||
BL03125___lev 2024 ATTATTTGAATTTGAATTTGCACGCCATCTACGATTCGGTTACAAAGGAT 2073
BSNT_03924___ 2080 TTTATCGAGTTGTGGGAGCG-TCAGCCAGCGGCAC-CCGGCAAAAAGAAG 2127
||.|||||.||.|||| .|| |.|.|| ||||..| |.||||||||||||
BL03125___lev 2074 TTCATCGATTTATGGG-CCGATAAACC-GCGGGTCTCAGGCAAAAAGAAG 2121
BSNT_03924___ 2128 GCATTGGTATCCATCTGCACCACGGGGAGCGGGACGGCCAAAAAGCTGGA 2177
||..|.||.|||||.|||||.||.||..||||.|||||.||.|||||.||
BL03125___lev 2122 GCGATCGTCTCCATTTGCACAACAGGCGGCGGAACGGCGAAGAAGCTCGA 2171
BSNT_03924___ 2178 AGACATTCTAACCACGATCGTAAACAAGGCCTCCGAT--ACACCGATTCA 2225
|||.|||.||||..|.|||||.|.||.|.|.||.||| ||| |.|||
BL03125___lev 2172 AGAGATTTTAACATCAATCGTGAGCAGGACATCTGATGAACA---AATCA 2218
BSNT_03924___ 2226 -CATATTGACCGTATCATCGATTAAGCTGGCCAACAGCATAAAAGAAATC 2274
|||.|||||.||..|||||||.||..|.||.|.|.||||.||||||||.
BL03125___lev 2219 GCATTTTGACGGTGCCATCGATCAAATTAGCAAGCCGCATCAAAGAAATT 2268
BSNT_03924___ 2275 GAAAAAGAGTATGAAATCCTTGCGACAGTCGGAACGAAAGACCCTAAAAT 2324
|||||||.||||||.||.|||||.||.||.||.|||||..||||||||||
BL03125___lev 2269 GAAAAAGCGTATGAGATTCTTGCCACGGTTGGCACGAAGAACCCTAAAAT 2318
BSNT_03924___ 2325 CAATGCTCCGCATGTATCTTTAGAAGTGTTAATTGAAGGGGAGGGAGAGA 2374
|.||||||||||.||..||||||||||.||.||||||||.||.||.||.|
BL03125___lev 2319 CGATGCTCCGCACGTCCCTTTAGAAGTATTGATTGAAGGCGAAGGGGAAA 2368
BSNT_03924___ 2375 AGCTGATTCAACAGGCGATTACAAAAGGAAGCATCCCCTTGAGCAATGGA 2424
|..|||||||.||||.||||.|||..||....|||||..|||||...|||
BL03125___lev 2369 AAGTGATTCAGCAGGTGATTGCAACCGGCGATATCCCGATGAGCGGCGGA 2418
BSNT_03924___ 2425 TTGAACGAAGCAAATATGATTGTCAGGGAGCTTTGCGAGGATAGCCTGAA 2474
||...||..|.||||.||.||||.|.||||||||||||.||.||||||||
BL03125___lev 2419 TTATCCGGTGAAAATGTGGTTGTAAAGGAGCTTTGCGAAGACAGCCTGAA 2468
BSNT_03924___ 2475 AAAATACCTTGTCTTCTTGAATCCCCATCATGTGATCGAAATGTTATTGG 2524
.||.||.||||||||.|||||||||.||||||||||.||.|||.|.||||
BL03125___lev 2469 GAAGTATCTTGTCTTTTTGAATCCCTATCATGTGATAGACATGCTGTTGG 2518
BSNT_03924___ 2525 AGTGGCTGCAAACCGTTCAAGATGAGCTGGGGGTCATTTTCAATAATGCG 2574
|||||||.||.||.||||||||.||.|||.|..|.|..||||..||.||.
BL03125___lev 2519 AGTGGCTTCAGACGGTTCAAGACGAACTGCGTATGACATTCAGCAACGCT 2568
BSNT_03924___ 2575 GTTTTGATCAAAGTCATTATGCACACGGCTTTCGCCTTTGAAAGGGTAAT 2624
||..|||||||||||||.|||||.||.|||||.||.|||||||||||.||
BL03125___lev 2569 GTGCTGATCAAAGTCATCATGCATACCGCTTTTGCTTTTGAAAGGGTGAT 2618
BSNT_03924___ 2625 TAAGCAAAATCCGATCGCTTTCTCAGAGGAAGAAGAGATCAATGATCAGC 2674
.||.||.||.|||||||||||..|.|||||.||||||||.||||||||||
BL03125___lev 2619 CAAACAGAACCCGATCGCTTTTCCGGAGGAGGAAGAGATGAATGATCAGC 2668
BSNT_03924___ 2675 -TGAAGGAAATGGTGT--ACGTGACAGAGCGAACATTAGCCCCTTATGAA 2721
||| |||.|.|.| ||.|.||||||..|||||||...|||||.|||
BL03125___lev 2669 TTGA---AAACGTTCTTCACATCACAGAGAAAACATTAAAGCCTTACGAA 2715
BSNT_03924___ 2722 GAAAAGCTCGGACTTCGC-ATAAGTGATGATGAAAAATTATTTATAGCCG 2770
||||||||.||.||| || ||.||.||.|||||||||.|.|||||.||..
BL03125___lev 2716 GAAAAGCTTGGTCTT-GCGATCAGCGAAGATGAAAAAATGTTTATCGCGT 2764
BSNT_03924___ 2771 CCATATTTGCTGAAGAAGTGCATGGCCAGCTGTTTTAA 2808
||||.||||||||||| |||.||.
BL03125___lev 2765 CCATCTTTGCTGAAGA---------------GTTATAG 2787
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.