Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02464 and BL02998
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:01
# Commandline: needle
# -asequence dna-align/BSNT_02464___ylaL.1.5803.seq
# -bsequence dna-align/BL02998___ylaL.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02464___ylaL-BL02998___ylaL.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02464___ylaL-BL02998___ylaL.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02464___ylaL
# 2: BL02998___ylaL
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 549
# Identity: 317/549 (57.7%)
# Similarity: 317/549 (57.7%)
# Gaps: 129/549 (23.5%)
# Score: 852.0
#
#
#=======================================
BSNT_02464___ 1 ATGAGCGTTATCCAAGTA------AAAGGCAATGTTACATATCCAATTAC 44
||||||.|| ||| |.|||.|||||.|..|||||.|||||
BL02998___yla 1 ATGAGCATT------GTAACGATCACAGGAAATGTAAAGTATCCGATTAC 44
BSNT_02464___ 45 CATTGATCCAAGCGTATGGATTTTTGATGATCGCAAATT----------- 83
..|.|||||.|||||.||||||||||||||.||.|||||
BL02998___yla 45 GCTCGATCCGAGCGTCTGGATTTTTGATGACCGAAAATTCGATCTCGAGC 94
BSNT_02464___ 84 --TTCGTTTGAC----CGCAAAGGGGACAGTCAAGACACATATTTACAAT 127
|||.|||.|| ||.|.||| ||||
BL02998___yla 95 AGTTCTTTTCACATTTCGGAGAGG--------------------TACA-- 122
BSNT_02464___ 128 CAGCCGGGGATGAA---TCCGACC------TTGATCCGGAACGCGTCATC 168
||||||| ..||||| ||||.|.||||||....|||
BL02998___yla 123 -------GGATGAAGATGACGACCTTGTGATTGACCGGGAACGGCAAATC 165
BSNT_02464___ 169 AGAG-AGGGGC-GAATTGCCCCGCCTACATTAAAGACGGAAAAACAATAT 216
|||| |||.|| |.|| |.|||||.||..|.||..|.||.|||.|.|||
BL02998___yla 166 AGAGAAGGTGCTGTAT--CGCCGCCGACGCTGAAATCAGAGAAAAAGTAT 213
BSNT_02464___ 217 GAGAAGCAAAAACTGATGAACGGCAGTTTCGCAATGAGACTTGGGACTGT 266
||.|||.|||||.||.|..||||||.|||||.|||.|..||||.|.||.|
BL02998___yla 214 GAAAAGGAAAAATTGCTTGACGGCACTTTCGGAATCAAGCTTGAGCCTTT 263
BSNT_02464___ 267 CCTGAAAAATGCTGAGCCGAACA-GCTCTG-CGACACAATGTGTATTTGT 314
..|||||||.||.|||..| .|| ||||.| ||.|| ||||..|.| |
BL02998___yla 264 TTTGAAAAACGCGGAGGTG-TCAGGCTCCGCCGTCA-AATGCCTCT---T 308
BSNT_02464___ 315 CACAAGTTCGGGAAAG--GCCGCCGTTTCTCTGGAAACCGCTC----TGA 358
||.|| ||| ||| |..|.||||| |||.|| |||
BL02998___yla 309 CAAAA---CGG--AAGGTGAAGACGTTT---------CCGTTCCAATTGA 344
BSNT_02464___ 359 A-----------CAGTATTGTCCATTTCAGTGAGGCAGGCAAGCCGATTC 397
| ||..|||.||...|||||..|...||||||||||.||.
BL02998___yla 345 AGAAGCGGGCGGCATGATTCTCTGCTTCAGCAACAAAGGCAAGCCGCTTG 394
BSNT_02464___ 398 AAGAAGGCGGCCCCGTGCATATTTACTTTGAAGACCCGGTTCATCACAAA 447
..||||.|||.||.||.||..||||.|||...|| |||||| |.||||
BL02998___yla 395 GCGAAGACGGGCCTGTACACGTTTATTTTCCCGA--CGGTTC-TAACAA- 440
BSNT_02464___ 448 CAGCCGAT----------TACCGATGTAAAAGAGATCGAAATCATTTAA 486
||| .|.||| ||||||||.||..|.||.||||||
BL02998___yla 441 -----GATGAATCCTGTGAAACGA-GTAAAAGAAATTCACATTATTTAA 483
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