Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02466 and BL02974
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:01
# Commandline: needle
# -asequence dna-align/BSNT_02466___ylaN.1.5803.seq
# -bsequence dna-align/BL02974___ylaN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02466___ylaN-BL02974___ylaN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02466___ylaN-BL02974___ylaN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02466___ylaN
# 2: BL02974___ylaN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 283
# Identity: 233/283 (82.3%)
# Similarity: 233/283 (82.3%)
# Gaps: 2/283 ( 0.7%)
# Score: 953.0
#
#
#=======================================
BSNT_02466___ 1 TTGGCTTCAGAGATGATAGTTGACCATCGGCAAAAAGCTTTTGAACTCTT 50
|||||.||.|||||..||||.||||||||..|||||||..|||..||.||
BL02974___yla 1 TTGGCGTCTGAGATTGTAGTCGACCATCGTGAAAAAGCACTTGCTCTGTT 50
BSNT_02466___ 51 AAAA-GTGGACGCTGAGAAGATTTTGAAGCTGATCCGAGTACAAATGGAT 99
|||| || ||.|||||.||.||.||.||||||||.|.|||.||||||||.
BL02974___yla 51 AAAACGT-GATGCTGATAAAATCTTAAAGCTGATTCAAGTGCAAATGGAC 99
BSNT_02466___ 100 AACTTAACGATGCCTCAATGTCCTCTATATGAAGAGGTTTTAGATACTCA 149
||||||||||||||||||||||||||.||||||||||||||||||||.||
BL02974___yla 100 AACTTAACGATGCCTCAATGTCCTCTTTATGAAGAGGTTTTAGATACACA 149
BSNT_02466___ 150 AATGTTCGGGCTTTCGAGGGAAATCGATTTTGCTGTCCGCCTGGGATTGG 199
|||||||||.||.||.||.|||||.|||||||||||||||||.|||||.|
BL02974___yla 150 AATGTTCGGACTCTCTAGAGAAATTGATTTTGCTGTCCGCCTTGGATTAG 199
BSNT_02466___ 200 TTGATGAAAAAGACGGTAAAGACCTTTTATACACATTGGAACGCGAATTG 249
|.||||||.||||.||||||||.||..|.||||...||||.||.||||||
BL02974___yla 200 TGGATGAAGAAGAGGGTAAAGAACTGCTTTACAGGCTGGAGCGTGAATTG 249
BSNT_02466___ 250 TCTGCTTTACATGACGCGTTTACAGCTAAATAA 282
|||||.||||||||.||.||||||...||||||
BL02974___yla 250 TCTGCATTACATGATGCATTTACAAAAAAATAA 282
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