Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_02451 and BL02967

See Amino acid alignment / Visit BSNT_02451 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:24:00
# Commandline: needle
#    -asequence dna-align/BSNT_02451___ylaB.1.5803.seq
#    -bsequence dna-align/BL02967___ylaB.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_02451___ylaB-BL02967___ylaB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02451___ylaB-BL02967___ylaB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02451___ylaB
# 2: BL02967___ylaB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 308
# Identity:     177/308 (57.5%)
# Similarity:   177/308 (57.5%)
# Gaps:          73/308 (23.7%)
# Score: 474.0
# 
#
#=======================================

BSNT_02451___      1 ATGAATCATAAAGAAAAAGAATCTGTTTTTGTAGACTTATACGACCTGTA     50
                     ||||...||.||||||||.||.|.||.|||.|.||.||.||.||.||.||
BL02967___yla      1 ATGACAAATGAAGAAAAAAAAGCGGTGTTTATCGATTTGTATGAGCTCTA     50

BSNT_02451___     51 TAAAGAAGGAGAGCTAGAGGATGAATCAATGGAATGGATGAAACAGCATG    100
                     |.|||||.|.||.||.||.||.|||.|.|||...|||||||||.||||||
BL02967___yla     51 TCAAGAAAGTGAACTGGAAGAGGAAACGATGATCTGGATGAAAGAGCATG    100

BSNT_02451___    101 AATCCCTATTTCAAAA-------GAATGCGGAAGACTTAAAG--AGTAAA    141
                     |.....|.|||||..|       ||| ||||.||     .||  .|||  
BL02967___yla    101 AGCAGTTTTTTCAGGATCAGGCTGAA-GCGGCAG-----CAGCCGGTA--    142

BSNT_02451___    142 ACTTGTTTAAAGAGAAGTCCCGG---TGCTGA----AGAAGA-------A    177
                             |.|||||..||||.|   |||..|    |||.||       |
BL02967___yla    143 --------ATAGAGAGCTCCCCGGCATGCAAAAAACAGATGATCATCAGA    184

BSNT_02451___    178 AGC-----CAAATC-AGATATATGAAAGTATACCTGTCTTCCATGTATAT    221
                     |||     ||.||| ||||.|.|    ||.|||..||        |||||
BL02967___yla    185 AGCTCCTTCATATCAAGATTTTT----GTTTACTCGT--------TATAT    222

BSNT_02451___    222 ---------CTGTTTCATTTTATTGGCCATTTGGATGACGGTGTGGTTTT    262
                              |||.|.|    |||   |.||||||||||||||||||||||
BL02967___yla    223 GGTGCTTTCCTGCTCC----TAT---CGATTTGGATGACGGTGTGGTTTT    265

BSNT_02451___    263 ACTTTTAA    270
                     ..||.|||
BL02967___yla    266 TTTTCTAA    273


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