Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01647 and BL02845
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:07
# Commandline: needle
# -asequence dna-align/BSNT_01647___ccrB.1.5803.seq
# -bsequence dna-align/BL02845___yhdU.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01647___ccrB-BL02845___yhdU.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01647___ccrB-BL02845___yhdU.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01647___ccrB
# 2: BL02845___yhdU
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 411
# Identity: 227/411 (55.2%)
# Similarity: 227/411 (55.2%)
# Gaps: 108/411 (26.3%)
# Score: 557.5
#
#
#=======================================
BSNT_01647___ 1 ---ATGACACTAGCGGGTATTTTCATAGGGGGCGGACTTGGCGCAATGCT 47
|||.| |||.|.|.||.|.||.|.|||.|||.|.||..|..|..|
BL02845___yhd 1 ATGATGGC---AGCTGCTTTTATGATCGCGGGAGGAATCGGGTCCGTTTT 47
BSNT_01647___ 48 TCGGTTCTGGCTTGGCAATG---TCATAAC----------CGCCAAAACC 84
..|.||.|||||.||||||| ||||..| |||| .||
BL02845___yhd 48 GAGATTTTGGCTGGGCAATGTGCTCATGGCGATGATTCCGCGCC---CCC 94
BSNT_01647___ 85 AAA----GGTCTGAGCCTGCCCATTGGCATACTGACAGTCAATATTCTCG 130
..| |||| |||.|| ||..||| ||||||||||||
BL02845___yhd 95 GCATTCCGGTC--AGCGTG---------ATGGTGA---TCAATATTCTCG 130
BSNT_01647___ 131 GAGCTC--TCGGGCTCGGAATATTTACAGGACTTCACGTTG-----CAAA 173
|||| |||..|||||.|||||.|.|.|.||...|.||| ||||
BL02845___yhd 131 --GCTCATTCGCTCTCGGCATATTCATAAGCCTCGGCATTGACAATCAAA 178
BSNT_01647___ 174 TGCTTCGGTCTCGCTTATC---ATCGGCACGGGGTTTTTTGGCGCCTTTA 220
||||||| |||| .||||.||.||.|||||.||.|.|||.|
BL02845___yhd 179 -----CGGTCTC---TATCGTGGTCGGAACTGGATTTTTCGGAGGCTTCA 220
BSNT_01647___ 221 CGACCTTTTCCACCTTCAGCGTTGAAAGTATTCAACTCCTTATGGC--CA 268
|.||.|||||.||.||||||||||||..|.|||| .|||.|||| ||
BL02845___yhd 221 CAACATTTTCGACGTTCAGCGTTGAAGCTGTTCA---GCTTTTGGCTGCA 267
BSNT_01647___ 269 AA-CGTGTAATAGAAAGCATC-----TTGTACATCGCCCTGACACTTTGC 312
|| ||.||| ||.||.|| || ||||||...||.||| .|.||
BL02845___yhd 268 AAGCGGGTA----AAGGCTTCAGCGGTT-TACATCCTGCTTACA-ATGGC 311
BSNT_01647___ 313 GGGTCGCTTTTGGC--ATTTTGGTGCGGCTG--------------GACAA 346
.|| |.|..|.||| |||.|||..||||.| ||
BL02845___yhd 312 AGG-CTCAATCGGCGGATTCTGGGCCGGCAGCATGCTGATTCCGTGA--- 357
BSNT_01647___ 347 TCACAATATAA 357
BL02845___yhd 357 ----------- 357
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