Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home
About
Genes
DNA alignment: BSNT_00714 and BL02808

See Amino acid alignment / Visit BSNT_00714 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:22:20
# Commandline: needle
#    -asequence dna-align/BSNT_00714___ycsI.1.5803.seq
#    -bsequence dna-align/BL02808___ycsI.2.5803.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00714___ycsI-BL02808___ycsI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00714___ycsI-BL02808___ycsI.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00714___ycsI
# 2: BL02808___ycsI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 802
# Identity:     563/802 (70.2%)
# Similarity:   563/802 (70.2%)
# Gaps:          23/802 ( 2.9%)
# Score: 1847.5
# 
#
#=======================================

BSNT_00714___      1 GTGGAGCAATTAAACAAAATGGCG-CCAAAGGATGTACGCGCCCTGATAC     49
                        ..|||..||||..|||| ||| ||..|.||.||..|.||.|||||.|
BL02808___ycs      1 ---TTGCATGTAAATGAAAT-GCGTCCTGACGAAGTCAGGGCTCTGATTC     46

BSNT_00714___     50 GAGAGGGGAAAATAAACGGG-CCGACCGCAGGCATGTCCGGCGGCTACGC     98
                     ||.|.|||.|||| |||||| |||||.||.||||||.||||.||.|...|
BL02808___ycs     47 GAAAAGGGGAAAT-AACGGGTCCGACAGCCGGCATGGCCGGGGGTTTTAC     95

BSNT_00714___     99 CCAAGCGAATCTTGTGGTTTTGAAAAAGGACCTTGCGTTTGATTTTCTGC    148
                     |||.||.||.||.|||.||||||||||.||.||.||.|||||.||..|||
BL02808___ycs     96 CCAGGCAAACCTGGTGATTTTGAAAAAAGAGCTCGCTTTTGAGTTCTTGC    145

BSNT_00714___    149 TGTTTTGCCAGCGAAATCAAAAGCCCTGCCCCGTGCTGGATGTGACTGAA    198
                     |||||||||||||.|||||||||||.||.||..|.||.|||||.||.||.
BL02808___ycs    146 TGTTTTGCCAGCGCAATCAAAAGCCGTGTCCGATTCTTGATGTCACGGAC    195

BSNT_00714___    199 GCAGGTTCGCCTGTGCCGTCTCTGGCTGCGCCTGATGCTGATATCAGAAC    248
                     .|.||.||.||.||.|||||..|..|.|||||.||.|||||||||.|.||
BL02808___ycs    196 CCCGGATCTCCGGTTCCGTCCATCACGGCGCCGGACGCTGATATCCGCAC    245

BSNT_00714___    249 GGACTTTCCGAAATACCGTATTTACAGGCACGGTATCCTAA----CGGAA    294
                     .||.|||||.||||||||..|.||||.||..||    |.||    ||||.
BL02808___ycs    246 CGATTTTCCAAAATACCGCGTATACAAGCGTGG----CGAATTGGCGGAT    291

BSNT_00714___    295 GAAGTATCTGATATTACGCCATACTGGGAGGACGATTTTGTCGGCTTTCT    344
                     |||||..|.|||||..|..|.|..|||||.|||||..|.|||||.|||.|
BL02808___ycs    292 GAAGTGACAGATATCTCTTCTTTATGGGAAGACGACATGGTCGGTTTTTT    341

BSNT_00714___    345 GATCGGATGCAGTTTCTCCTTTGAACAGGCACTGATCAATAATGGGATAG    394
                     .|||||.|||||.||..|.||.|||||.||..|.||.|||||.||.||..
BL02808___ycs    342 AATCGGCTGCAGCTTTACGTTCGAACAAGCGTTAATGAATAACGGAATCC    391

BSNT_00714___    395 CTGTCCGGCATATTGATGAGGGGACAAACGTCTCAATGTATAAAACGAAT    444
                     |||||.|.||.|||||.||...|..|||.|||.|.||||||.||||||||
BL02808___ycs    392 CTGTCAGACACATTGAAGAAAAGCGAAATGTCCCGATGTATCAAACGAAT    441

BSNT_00714___    445 ATCGATTGTGTGCCGGCGGGGGCG-TTTCACGGACAGATGGTTGTCAGCA    493
                     ||...||||||.||||| .||.|| |||||.||.|..|||||.|||||||
BL02808___ycs    442 ATTCCTTGTGTCCCGGC-AGGCCGTTTTCAAGGGCCTATGGTCGTCAGCA    490

BSNT_00714___    494 TGAGGCCGGTTCCTGAACGGCTGGCTGTACGTGCCGCACAAGTGACCTCG    543
                     |||||||||||||.|||..||.|||.||.||.||||..||.||.||.||.
BL02808___ycs    491 TGAGGCCGGTTCCGGAAGAGCAGGCGGTGCGAGCCGTTCAGGTTACATCA    540

BSNT_00714___    544 CGTTTTCCGGCTGTGCACGGAGGGCCGATCCATATCGGCAATCCGGGAGC    593
                     .|..||||.||.||.|||||||||||..||||||||||||.|||.|.|||
BL02808___ycs    541 AGGCTTCCCGCCGTTCACGGAGGGCCTGTCCATATCGGCAGTCCAGAAGC    590

BSNT_00714___    594 AATCGGGATTCGCGATCTCGGGAAACCGGATTTCGGAGATGCCGTTTCCA    643
                     .|||||.||....||..|||..|||||.||||||||.|||||.||..|.|
BL02808___ycs    591 CATCGGTATAACAGACATCGCAAAACCCGATTTCGGCGATGCGGTAACGA    640

BSNT_00714___    644 TTCGTGACGGCGAGGTTCCTGTTTTTTGGGCATGCGGGGTGACCCCGCAA    693
                     |.....|.||.||.|||||.||.||.|||||.|||||.||.|||||.||.
BL02808___ycs    641 TAAAAAAAGGGGAAGTTCCGGTATTCTGGGCTTGCGGCGTCACCCCTCAG    690

BSNT_00714___    694 GCCGTGGCTATGAATGTAAAGCCTGAAATGGTCATCACACATGCGCCGGG    743
                     ||.||.||.|||.|.|.||.|||.||..||.|.||.||.|||.||||.||
BL02808___ycs    691 GCAGTCGCAATGCACGCAAGGCCGGAGCTGATGATTACGCATTCGCCCGG    740

BSNT_00714___    744 GCATATGCTCATCACAGATATTCGAGACGAGTCGCTTGCGGTGCTGTAA-    792
                     .||||||||..|.||.|||.||||.||.||.....||  |||| |||.| 
BL02808___ycs    741 CCATATGCTGGTTACCGATGTTCGGGATGAACAATTT--GGTG-TGTTAT    787

BSNT_00714___    792 --    792
                       
BL02808___ycs    788 AG    789


#---------------------------------------
#---------------------------------------
Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_00714 and BL02808

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
