Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00348 and BL02704
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:00
# Commandline: needle
# -asequence dna-align/BSNT_00348___glmS.1.5803.seq
# -bsequence dna-align/BL02704___glmS.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00348___glmS-BL02704___glmS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00348___glmS-BL02704___glmS.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00348___glmS
# 2: BL02704___glmS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1810
# Identity: 1452/1810 (80.2%)
# Similarity: 1452/1810 (80.2%)
# Gaps: 14/1810 ( 0.8%)
# Score: 5839.0
#
#
#=======================================
BSNT_00348___ 1 ATGTGTGGAATCGTAGGTTATATCGGTCAGCTTGATGCGAAGGAAATTTT 50
||||||||.||.|||||||||||.||.|||||||||||.|||||||||||
BL02704___glm 1 ATGTGTGGTATTGTAGGTTATATTGGCCAGCTTGATGCAAAGGAAATTTT 50
BSNT_00348___ 51 ATTAAAAGGGTTAGAGAAGCTTGAGTATCGCGGTTATGACTCTGCTGGTA 100
|.|.|||||.||.||||||||.|||||||||||.||.||.||.|||||.|
BL02704___glm 51 ACTTAAAGGTTTGGAGAAGCTGGAGTATCGCGGCTACGATTCAGCTGGAA 100
BSNT_00348___ 101 TTGCTGTTGCCAACGAACAGGGAATCCATGTGTTCAAAGAAAAAGGACGC 150
|.|||||.||.||||||.|.||..|.||.|||||.||||||||||||||.
BL02704___glm 101 TCGCTGTAGCGAACGAAGACGGCGTACACGTGTTTAAAGAAAAAGGACGG 150
BSNT_00348___ 151 ATTGCAGATCTTCGTGAAGTTGTGGATGCCAATGTAGAGGCGAAAGCCGG 200
||.||.||||||||.|.||..||.|||||.||.||..||.|..||||.||
BL02704___glm 151 ATCGCCGATCTTCGCGCAGCCGTTGATGCAAACGTGAAGTCACAAGCGGG 200
BSNT_00348___ 201 AATTGGGCATACTCGCTGGGCTACACACGGCGAACCAAGCTATCTGAACG 250
|||.||.||.||.||||||||.||.|||||.|||||.|||..|||.||||
BL02704___glm 201 AATCGGACACACGCGCTGGGCGACTCACGGAGAACCGAGCCGTCTAAACG 250
BSNT_00348___ 251 CTCACCCGCATCAAAGCGCACTGGGCCGCTTTACACTTGTTCATAACGGC 300
||||.|||||||||||||||...|||||.|||||||||||||||||||||
BL02704___glm 251 CTCATCCGCATCAAAGCGCATCAGGCCGTTTTACACTTGTTCATAACGGC 300
BSNT_00348___ 301 GTGATCGAGAACTATGTTCAGCTGAAGCAAGAGTATTTGCAAGATGTAGA 350
||.|||||.|||||||||||.||||.||..||.|||||.||.||||||..
BL02704___glm 301 GTCATCGAAAACTATGTTCAACTGACGCGCGAATATTTACACGATGTAAC 350
BSNT_00348___ 351 GCTTAAAAGTGACACCGATACAGAAGTAGTCGTTCAAGTAATCGAGCAAT 400
.||||||||.||.||.||||||||.||.|||||||||||.||||||||||
BL02704___glm 351 CCTTAAAAGCGATACGGATACAGAGGTTGTCGTTCAAGTGATCGAGCAAT 400
BSNT_00348___ 401 TCGTCAATGGAGGACTTGAGACAGAAGAAGCGTTCCGTAAAACACTTACA 450
||||||||...||.|||||.|||||||||||||||||..||||.||.|..
BL02704___glm 401 TCGTCAATAACGGCCTTGACACAGAAGAAGCGTTCCGCCAAACGCTCATG 450
BSNT_00348___ 451 CTGTTAAAAGGCTCTTATGCAATTGCTTTATTCGATAACGACAACAGAGA 500
|||.|.||||||||||||||.|||||.|||||||||.|.||.||||.|||
BL02704___glm 451 CTGCTCAAAGGCTCTTATGCGATTGCATTATTCGATCATGAAAACAAAGA 500
BSNT_00348___ 501 AACGATTTTTGTAGCGAAAAACAAAAGCCCTCTATTAGTAGGTCTTGGAG 550
|||.||.|.|||.||||||||.||||||||.||..|.||.||.|||||||
BL02704___glm 501 AACAATCTATGTTGCGAAAAATAAAAGCCCGCTTCTTGTCGGCCTTGGAG 550
BSNT_00348___ 551 ATACATTCAACGTCGTAGCATCTGATGCAATGGCGATGCTTCAAGTAACC 600
|.|..|||||.||.||.||.||||||||.|||||||||||||||||.||.
BL02704___glm 551 ACAATTTCAATGTTGTCGCGTCTGATGCGATGGCGATGCTTCAAGTGACA 600
BSNT_00348___ 601 AACGAATATGTTGAGCTGATGGATAAAGAAATGGTTATCGTCACTGATGA 650
||||||||.||.|||||.|||||||||||||||||.||.|||||.||..|
BL02704___glm 601 AACGAATACGTGGAGCTTATGGATAAAGAAATGGTGATTGTCACAGACAA 650
BSNT_00348___ 651 CCAAGTTGTCATCAAAAACCTTGATGGTGACGTGATTACACGTGCGTCTT 700
..||||.||.|||||||||||.||.||.||..||||..|||||||.||.|
BL02704___glm 651 AAAAGTCGTGATCAAAAACCTCGACGGAGAATTGATGTCACGTGCCTCAT 700
BSNT_00348___ 701 ATATTGCTGAGCTTGATGCCAGTGATATCGAAAAAGGCACGTACCCTCAC 750
|||||||.|||||||||||.||.|||||||||||||||||.|||||||||
BL02704___glm 701 ATATTGCAGAGCTTGATGCGAGCGATATCGAAAAAGGCACATACCCTCAC 750
BSNT_00348___ 751 TACATGTTGAAAGAAACGGATGAGCAGCCTGTTGTTATGCGCAAAATCAT 800
||||||||.|||||||..|||||.|||||..||||.|||||.||||||||
BL02704___glm 751 TACATGTTAAAAGAAATCGATGAACAGCCGCTTGTCATGCGGAAAATCAT 800
BSNT_00348___ 801 CCAAACGTATCAAGATGAAAACGGCAAGCTGTCTGTGCCTGGTGATATCG 850
.||.|||||.||||||||||||||||||||.||..|.|||||.||.||..
BL02704___glm 801 TCAGACGTACCAAGATGAAAACGGCAAGCTCTCCATTCCTGGAGACATTT 850
BSNT_00348___ 851 CTGCCGCTGTAGCGGAAGCGGACCGCATCTATATCATTGGCTGCGGAACA 900
|...||||||.||.|||||.||||||.||||||||||||.|||||||||.
BL02704___glm 851 CAAACGCTGTTGCTGAAGCCGACCGCGTCTATATCATTGCCTGCGGAACT 900
BSNT_00348___ 901 AGCTACCATGCAGGACTTGTCGGTAAACAATATATTGAAATGTGGGCAAA 950
||||||||||||||.||||||||.||.||||.||||||||..|||||.||
BL02704___glm 901 AGCTACCATGCAGGTCTTGTCGGCAAGCAATTTATTGAAACATGGGCGAA 950
BSNT_00348___ 951 CGTGCCGGTTGAAGTGCATGTAGCGAGTGAATTCTCCTACAACATGCCGC 1000
.||.||||.||||||.|||||.||.||.||||||||.|||||.|||||..
BL02704___glm 951 AGTTCCGGCTGAAGTCCATGTCGCAAGCGAATTCTCTTACAATATGCCAT 1000
BSNT_00348___ 1001 TTCTGTCTAAGAAACCGCTCTTCATTTTCCTTTCTCAAAGCGGAGAAACA 1050
|.||.|||.||||.|||||.||.||.||..|||||||||||||||||||.
BL02704___glm 1001 TGCTTTCTGAGAAGCCGCTGTTTATCTTTATTTCTCAAAGCGGAGAAACG 1050
BSNT_00348___ 1051 GCAGACAGCCGCGCGGTTCTCGTTCAAGTCAAAGCGCTCGGACACAAAGC 1100
||.||||||||||||||||||||.||.||.|||..|||||||||||||||
BL02704___glm 1051 GCTGACAGCCGCGCGGTTCTCGTACAGGTGAAAAAGCTCGGACACAAAGC 1100
BSNT_00348___ 1101 CCTGACAATCACAAACGTACCTGGATCAACGCTTTCTCGTGAAGCTGACT 1150
.||||||.|.||.||||||||.|||||.||||||||.||||||||.||||
BL02704___glm 1101 GCTGACATTGACCAACGTACCGGGATCCACGCTTTCCCGTGAAGCGGACT 1150
BSNT_00348___ 1151 ATACATTGCTGCTTCATGCAGGCCCTGAGATCGCTGTTGCGTCAACAAAA 1200
||||..|..|.||..||||.||||||||.|||||.||.||||||||||||
BL02704___glm 1151 ATACGCTTTTACTGAATGCCGGCCCTGAAATCGCGGTAGCGTCAACAAAA 1200
BSNT_00348___ 1201 GCATACACTGCACAAATTGCAGTTCTTGCGGTTCTTGCTTCTGTGGCTGC 1250
|||||.||.||.|||||.||.|||||.||..||.|.||..|.|||.||||
BL02704___glm 1201 GCATATACGGCGCAAATCGCCGTTCTCGCAATTTTGGCAGCCGTGACTGC 1250
BSNT_00348___ 1251 TGACAAAAA----CGGCATCGATATCGGATTTGACCTCGTCAAAGAACTC 1296
.| ||| |||||..||..||||.|||||.||.||||||||.|||
BL02704___glm 1251 GG----AAAGCCGCGGCAAAGAACTCGGCTTTGATCTTGTCAAAGAGCTC 1296
BSNT_00348___ 1297 G---CTATCGCTGCAAACGCAATGGAAGCTCTATGCGACCAGAAAGACGA 1343
| .|||| |.||||||.||||||||.||.||||||||.||||||||
BL02704___glm 1297 GGCATTATC---GGAAACGCGATGGAAGCCCTTTGCGACCAAAAAGACGA 1343
BSNT_00348___ 1344 AATGGAAATGATCGCCCGTGAATACCTGACTGTATCCAGAAACGCTTTCT 1393
|||||||||||||||||||||||||.||||.|||.|..|.||.||.||.|
BL02704___glm 1344 AATGGAAATGATCGCCCGTGAATACTTGACCGTAACACGCAATGCATTTT 1393
BSNT_00348___ 1394 TCATCGGACGTGGCCTTGACTACTTCGTATGTGTCGAAGGCGCACTGAAG 1443
|||||||.||.|||||.|||||.|||||.||..|||||||..|.||||||
BL02704___glm 1394 TCATCGGCCGCGGCCTCGACTATTTCGTCTGCCTCGAAGGATCCCTGAAG 1443
BSNT_00348___ 1444 CTGAAAGAGATTTCTTACATCCAGGCAGAAGGTTTTGCCGGCGGTGAGCT 1493
||||||||||||||||||||.||.||.|||||.||.||||||||.||..|
BL02704___glm 1444 CTGAAAGAGATTTCTTACATTCAAGCTGAAGGCTTCGCCGGCGGCGAATT 1493
BSNT_00348___ 1494 AAAGCACGGAACGATTGCCTTGATCGAACAAGGAACACCAGTATTCGCAC 1543
.||||||||.|||||.||.|||||||||.|.||.|||||.||..||||.|
BL02704___glm 1494 GAAGCACGGTACGATCGCATTGATCGAAGACGGCACACCGGTCATCGCCC 1543
BSNT_00348___ 1544 TGGCAACTCAAGAGCACGTAAACCTAAGCATCCGCGGAAACGTCAAAGAA 1593
|.||.||.||.||||||||.|||.||||||||||||||||||||||||||
BL02704___glm 1544 TTGCGACACAGGAGCACGTCAACTTAAGCATCCGCGGAAACGTCAAAGAA 1593
BSNT_00348___ 1594 GTTGCCGCTCGCGGAGCAAACACATGCATCATCTCACTGAAAGGCCTAGA 1643
||..|.||.|||||.||.|||.|.|||.|.|||||.|||||||||||.||
BL02704___glm 1594 GTGACAGCCCGCGGCGCCAACCCTTGCGTGATCTCCCTGAAAGGCCTGGA 1643
BSNT_00348___ 1644 CGATGCGGATGACAGATTCGTACTGCCGGAAGTAAACCCAGCGCTTGCTC 1693
.||.||.||.|||.|.|||||.|||||.|||||..|.||.|.|||.||.|
BL02704___glm 1644 AGAAGCAGACGACCGCTTCGTCCTGCCTGAAGTGCATCCGGAGCTCGCAC 1693
BSNT_00348___ 1694 CGTTGGTATCTGTTGTTCCATTGCAGCTGATCGCTTACTATGCTGCACTG 1743
||.|.||.||.||..|.||..|||||||||||||.|||||.||.||.|||
BL02704___glm 1694 CGCTCGTCTCCGTCATCCCGCTGCAGCTGATCGCATACTACGCAGCGCTG 1743
BSNT_00348___ 1744 CATCGCGGCTGTGATGTGGATAAACCTCGTAACCTTGCGAAGAGTGTTAC 1793
||.|||||||||||.||.|||||.||.||.|||||.|||||||||||.||
BL02704___glm 1744 CACCGCGGCTGTGACGTTGATAAGCCACGGAACCTGGCGAAGAGTGTGAC 1793
BSNT_00348___ 1794 TGTGGAGTAA 1803
.||||||||.
BL02704___glm 1794 GGTGGAGTAG 1803
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