Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01969 and BL02677
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:30
# Commandline: needle
# -asequence dna-align/BSNT_01969___yjcA.1.5803.seq
# -bsequence dna-align/BL02677___yjcA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01969___yjcA-BL02677___yjcA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01969___yjcA-BL02677___yjcA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01969___yjcA
# 2: BL02677___yjcA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 379
# Identity: 256/379 (67.5%)
# Similarity: 256/379 (67.5%)
# Gaps: 44/379 (11.6%)
# Score: 809.0
#
#
#=======================================
BSNT_01969___ 1 GTGGTTATAAATGGGCTGACAATTGT--------TCTTCTATCGCTTGCG 42
|| |.||.||| ||||....||.| |.||||||| |||
BL02677___yjc 1 GT-GATACAAA---GCTGGTTTTTATTTTTTTTATTTTCTATC----GCG 42
BSNT_01969___ 43 GTCTTTCGGCTCGCCCGCCTGCTGGTGTTTGACACGATTATGGCGCCGCT 92
||.||||||||..|..|.|||.|.|||||.||||||||.|||||||||.|
BL02677___yjc 43 GTATTTCGGCTGACGAGGCTGATTGTGTTCGACACGATCATGGCGCCGTT 92
BSNT_01969___ 93 TCGCAGTCTGTTTCATGAAGAGAAGGAAGAAAAGGATGCG----GACGGG 138
|.|.||.|||||||||||||||...|||||||| |..|| .|||||
BL02677___yjc 93 TAGAAGCCTGTTTCATGAAGAGGTTGAAGAAAA--AAACGAAAAAACGGG 140
BSNT_01969___ 139 A-ACATTGAAACCTATATCGTGATTAAGGGAACCGGTGTCAGGGCGTTTA 187
| |.|..|||||.|||.|.||.||.||.||||..||.||.||.||||...
BL02677___yjc 141 AGAGACCGAAACGTATCTTGTCATGAAAGGAAAAGGCGTGAGAGCGTGGG 190
BSNT_01969___ 188 TTGGTGAATTGCTGAGCTGCTATTGGTGCACAGGCGTGTGGTGCGCCGGC 237
|.||.||..||||||||||||||||||||||.|||||||||||..|||..
BL02677___yjc 191 TCGGCGAGCTGCTGAGCTGCTATTGGTGCACGGGCGTGTGGTGTACCGCG 240
BSNT_01969___ 238 TTTTTG-----ATTTTATGCCAGGCGTTGATCCCGCAA--GCGGCGCAGT 280
|||||| .|||||.|| ..|||.|||.|..| ||.| |.|
BL02677___yjc 241 TTTTTGCTTGTTTTTTACGC----ATTTGTTCCGGTCATTGCTG---AAT 283
BSNT_01969___ 281 GGCTGATTTTACT--TTTGGCGATCGCCGGCCTTGCCGGCATCATAGAAA 328
||||||||.|.|| ||| |||||||||||||.||.||..|..|.||||
BL02677___yjc 284 GGCTGATTCTTCTGCTTT--CGATCGCCGGCCTGGCTGGAGTATTGGAAA 331
BSNT_01969___ 329 CGCTCGTATCAAAATGGCTGCAAGAATAA 357
||.||||.||.|||||||| .||.|.|
BL02677___yjc 332 CGATCGTTTCCAAATGGCT---CGATTGA 357
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