Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04672 and BL02612
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:49
# Commandline: needle
# -asequence dna-align/BSNT_04672___yueJ.1.5803.seq
# -bsequence dna-align/BL02612___yueJ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04672___yueJ-BL02612___yueJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04672___yueJ-BL02612___yueJ.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04672___yueJ
# 2: BL02612___yueJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 579
# Identity: 412/579 (71.2%)
# Similarity: 412/579 (71.2%)
# Gaps: 54/579 ( 9.3%)
# Score: 1457.5
#
#
#=======================================
BSNT_04672___ 1 ATGAAAAAAGCACTTATTTGTATTGATTATACGAATGATTTTGTGGCGAG 50
|||||||||||.|||||.|||||.||||||||||||||.|||||.|| ||
BL02612___yue 1 ATGAAAAAAGCTCTTATATGTATAGATTATACGAATGACTTTGTCGC-AG 49
BSNT_04672___ 51 -TGACGGAAAATTGACCTGCGGGGAGCCCGGCAGAATGATTGAAGA---- 95
||||||.||..||||.||||||||.||||||.|.|..||.|||||
BL02612___yue 50 CTGACGGTAAGCTGACGTGCGGGGAACCCGGCCGCAAAATCGAAGACGCC 99
BSNT_04672___ 96 --GGCGATCGTCAATTTAACCGAAGA-------ATTCATCACAAACGGTG 136
|||| |||| .||..|| ||||| ||||||.|
BL02612___yue 100 GTGGCG--CGTC-------TCGCGGATACGTTTATTCA----AAACGGCG 136
BSNT_04672___ 137 ATTACGTCGTATTAGCAGTAGATTCTCATGCTGAAGG--GGATCAATA-- 182
||||.||||||||.|||||.|||||.||.| ||| || |.|||
BL02612___yue 137 ATTATGTCGTATTTGCAGTCGATTCACACG----AGGCCGG--CGATACG 180
BSNT_04672___ 183 --TCACCCCGAAACCCGTCTTTTTCCTCCGCATAATATAAAAGGCACGGA 230
|||.||.|||||||||.|.|||||||||||||||||||||||.||...
BL02612___yue 181 CTTCATCCGGAAACCCGTTTGTTTCCTCCGCATAATATAAAAGGTACATC 230
BSNT_04672___ 231 AGGAAAAGATCTGTACGGAAAGCTT-------TTGCCTCTATATCAGAAA 273
||||.|.|||.|.|||||.|||||| || ||||..|||
BL02612___yue 231 AGGACAGGATTTATACGGGAAGCTTGAAAAGCTT-------TATCGAAAA 273
BSNT_04672___ 274 CATGAACATGAGCCTAATGTTTACTACATGGAAAAAACGAGATATTCTGC 323
||.|||||.||.|..|||||.||.||||||||||||||.||.||.|||||
BL02612___yue 274 CACGAACACGATCAGAATGTCTATTACATGGAAAAAACAAGGTACTCTGC 323
BSNT_04672___ 324 TTTTGCGGGAACTGATTTAGAGCTCAAACTCAGAGAGCGGCAGATTGGCG 373
||||||.||.||..|..|.|||||.||.||..|.||..||.|.|||...|
BL02612___yue 324 TTTTGCCGGGACAAACCTCGAGCTGAAGCTTCGTGAAAGGGATATTCAAG 373
BSNT_04672___ 374 AACTGCACCTTGCCGGTGTCTGCACAGATATTTGTGTGTTGCATACAGCT 423
||||||||||||..||.||.|||||||||||.||.|||.|.|||||.||.
BL02612___yue 374 AACTGCACCTTGTTGGCGTATGCACAGATATATGCGTGCTCCATACCGCA 423
BSNT_04672___ 424 GTTGACGCATATAACAAAGGTTTTCGGATTGTTGTGCATAAACAAGCTGT 473
||.||.||.|||||.|||||.|||....||||..|.|||.||.|.||.||
BL02612___yue 424 GTAGATGCTTATAATAAAGGGTTTAATCTTGTCATTCATCAAAACGCAGT 473
BSNT_04672___ 474 TGCCAGCTTTAATCAGGAGGGGCACGCATGGGCTCTTTCCCATTTTGCAA 523
.||.||||||||.|.|||.||.||||..|||||||||||.||||||||||
BL02612___yue 474 GGCTAGCTTTAACCCGGACGGACACGACTGGGCTCTTTCTCATTTTGCAA 523
BSNT_04672___ 524 ACAGCATCGGAGCGCAAGTGGCAGAGTAA 552
|||.|.|.|||||...||||.||||.|.|
BL02612___yue 524 ACACCCTGGGAGCCTCAGTGTCAGATTGA 552
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