Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04649 and BL02543
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:48
# Commandline: needle
# -asequence dna-align/BSNT_04649___maeN.1.5803.seq
# -bsequence dna-align/BL02543___maeN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04649___maeN-BL02543___maeN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04649___maeN-BL02543___maeN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04649___maeN
# 2: BL02543___maeN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1397
# Identity: 1009/1397 (72.2%)
# Similarity: 1009/1397 (72.2%)
# Gaps: 103/1397 ( 7.4%)
# Score: 3530.5
#
#
#=======================================
BSNT_04649___ 1 ATGGGAGCAATTCCAAAAACGGGGACAATTT--CACCTGAGCAAAAAGAC 48
||||.|||| .||||| .|||| .||| ||..|.|||
BL02543___mae 1 ATGGAAGCA---GCAAAA--------GATTTGAAACC-GATTACAAA--- 35
BSNT_04649___ 49 TCACAGG------AGAAAAACCTGTTTCAAAAAATT----------TGGT 82
|||| || |||||| |.||||.||| ||.|
BL02543___mae 36 TCAC-GGTCATAAAGAAAA-------TAAAAATATTTTCCATAAGCTGAT 77
BSNT_04649___ 83 C--TTGGGAAATCGGTGTGATTCCTTTGCCATTATACACAGTATT----- 125
| .|||.|||||||.||||||||.||.||..|||| ||||
BL02543___mae 78 CAACTGGAAAATCGGCGTGATTCCGTTTCCGCTATA-----TATTGCGCT 122
BSNT_04649___ 126 --AGCTGTTATTATTATTCTTGCAGCCTATTACAATGAGCTGCCGGCAAA 173
.|||| |||.||.||||.|||||.||.|..|||||..||||| ||
BL02543___mae 123 TGCGCTG--ATTGTTTTTCTGGCAGCTTACTTTAATGAATTGCCG---AA 167
BSNT_04649___ 174 T---ATGCTTGGCGGGTTTGCCATCATTATGATTCTTGGTGTGTTTCTCG 220
| |||||.|||||.||.||..|||||||||||||.||..|.|||||||
BL02543___mae 168 TGACATGCTCGGCGGTTTCGCGGTCATTATGATTCTCGGCATTTTTCTCG 217
BSNT_04649___ 221 GAGACATAGGCCAACGCATACCGATATTGAAGGATATTGGCGGCCCTGCT 270
|.||..|.||.||.|||||.|||||.||.||.|||||.|||||.|||||.
BL02543___mae 218 GGGATGTCGGACAGCGCATTCCGATTTTAAAAGATATCGGCGGACCTGCC 267
BSNT_04649___ 271 ATTTTATCTTTGTTTGTTCCTTCATTTTTAGTCTTTTACAATGTACTGAA 320
|||.||||..|||||||||||||.||.||||||||||.|||.||.||.||
BL02543___mae 268 ATTCTATCGCTGTTTGTTCCTTCGTTCTTAGTCTTTTTCAAAGTGCTTAA 317
BSNT_04649___ 321 TTCAACATCTTTAGACGCTGTAACCAAC-TTGATGAAAACGTCTAACTTC 369
..|..|||||.|.||.||.||.| |||| ||||||||||||||.||.|||
BL02543___mae 318 CCCTGCATCTATGGAAGCGGTTA-CAACTTTGATGAAAACGTCAAATTTC 366
BSNT_04649___ 370 CTTTATTTCTATATCGCTTGCCTTGTTGTGGGAAGTATCCTCGGTATGAA 419
.|.||||||||.|||||.||..|.||.|.|||||||||..|.||.|||.|
BL02543___mae 367 TTGTATTTCTACATCGCATGTTTAGTCGCGGGAAGTATTTTAGGAATGCA 416
BSNT_04649___ 420 CAGAATTGTTTTAATACAGGGGTTTATCAGAATGTTCGTTCCACTGGTTG 469
..|.|..|||.|.||.||.||.|||||.||||||||||||||..||.|.|
BL02543___mae 417 TCGCACGGTTCTGATTCAAGGTTTTATGAGAATGTTCGTTCCGTTGTTGG 466
BSNT_04649___ 470 CAGGAACGATCGCGGCCGTTGCAGCCGGCATCCTTGTCGGATTTATT-TT 518
|.||.||||||||.||.|||||.|||||.||.||.||||| |.|.|| ||
BL02543___mae 467 CCGGGACGATCGCAGCGGTTGCCGCCGGTATTCTCGTCGG-TCTGTTATT 515
BSNT_04649___ 519 TGGCTATAGTGCCTATGATTCCTTTTTCTTTGTTGTTGTCCCGATTATTG 568
||||||.||..|.|||||..|.||.||||||.||.||||.||||||||||
BL02543___mae 516 TGGCTACAGCCCTTATGAAGCTTTCTTCTTTATTATTGTACCGATTATTG 565
BSNT_04649___ 569 CCGGGGGAATAGGCGAAGGAATTTTGCCGCTTTCAATCGCCTACTCACAA 618
||||.||.||.||||||||.||..|||||||.|||.||||||||||.|||
BL02543___mae 566 CCGGAGGCATCGGCGAAGGCATCCTGCCGCTGTCACTCGCCTACTCGCAA 615
BSNT_04649___ 619 ATACTGGGCTCA-TCTGCTGATGTATTTGTGTCTCAGCTGGTTCCAGCAG 667
||..|||| .|| ||..|.|||||||||||.||.|||||..||||.||.|
BL02543___mae 616 ATTTTGGG-ACAGTCCACCGATGTATTTGTTTCACAGCTCATTCCGGCCG 664
BSNT_04649___ 668 CAATTATAGGAAATGTTTTTGCTATCATATGTGCAGCC---TTAATGAAA 714
|.|||||.|||||.||..||||.|||||.| ||||| .|.||||||
BL02543___mae 665 CTATTATCGGAAACGTCGTTGCCATCATCT---CAGCCGGACTGATGAAA 711
BSNT_04649___ 715 AAGCTTGGCGATAAGCGTCCAGATCTAAACGGGAACGGACGTCTCGTAAA 764
||||||||.||.||||||||.||.||.|||||.|||||..|.|||||.||
BL02543___mae 712 AAGCTTGGGGAAAAGCGTCCTGAACTGAACGGTAACGGCAGACTCGTTAA 761
BSNT_04649___ 765 ATCTAAAAAAGCAAATGAGATTTTCAATCAAAAAGAAGCCGAAGCAAAAA 814
|||.|||||||...||||.||||||||.||||||||||..||..|.||||
BL02543___mae 762 ATCGAAAAAAGACGATGAAATTTTCAACCAAAAAGAAGAGGAGCCGAAAA 811
BSNT_04649___ 815 TTGATTTCAAATTAATGGGAGCAGGAGTTCTGCTCGCGTGTACATTCTTT 864
|.||.||.|||||||||||.||.||.|||.|..||||.|||.|.|||||.
BL02543___mae 812 TCGACTTGAAATTAATGGGTGCCGGCGTTTTAATCGCATGTTCCTTCTTC 861
BSNT_04649___ 865 ATTTTTGGCGGGTTATTGGAGAAATTCATCTTCATCCCGGGCGCGATCTT 914
|||||.|||||.||..|....||.||||||...||.|||||.||||||.|
BL02543___mae 862 ATTTTCGGCGGTTTGGTCTCCAAGTTCATCGCGATTCCGGGAGCGATCCT 911
BSNT_04649___ 915 AATGATTATTTCAGCTGCGGCTGTCAAGTATGCAAATATTCTTCCGAAAA 964
.|||||.||..||||.||.||.||.||.||||||||..||||.||...||
BL02543___mae 912 GATGATCATCGCAGCGGCTGCCGTAAAATATGCAAAGCTTCTGCCTGCAA 961
BSNT_04649___ 965 AAATGGAAGAAGGCGCTTACCAGCTTTATAAGTTTATTTCTTCAAGCTTT 1014
..||||||.||||||||.||||||||||.|||||.||.||.||||||||.
BL02543___mae 962 GCATGGAAAAAGGCGCTCACCAGCTTTACAAGTTCATGTCATCAAGCTTC 1011
BSNT_04649___ 1015 ACATGGCCGCTGATGGTCGGTCTCGGCATCCTCTTTAT-TCCGT-TGGAT 1062
||.|||||||||||||||||.|||||||| ||||||| |||.| |.|||
BL02543___mae 1012 ACTTGGCCGCTGATGGTCGGGCTCGGCAT--TCTTTATATCCCTCTTGAT 1059
BSNT_04649___ 1063 GACGTAGCGTCTGTGATTTCTATACCGTTTG----TCAT---CATCTGTA 1105
||.||.||||||||.||||| || || |||| |.||||..
BL02543___mae 1060 GATGTGGCGTCTGTTATTTC----CC---TGCGCTTCATCGCCGTCTGCG 1102
BSNT_04649___ 1106 TTTCAGTTGTTATCGCGATGATTGGT----TCTGGATATTTCGTAGGCAA 1151
.||||||.||.||.||.| |||| ||.||.||.||.||.||.||
BL02543___mae 1103 CTTCAGTCGTCATTGCCA----TGGTGACATCAGGCTACTTTGTCGGAAA 1148
BSNT_04649___ 1152 GCTGATGAACATGTATCCGGTTGAATCCGCAATCGTTACCTGCTGCCACA 1201
..|.|||||||||||.||.||||||||.||.|||||.||..||||.||||
BL02543___mae 1149 ATTAATGAACATGTACCCTGTTGAATCAGCGATCGTCACAGGCTGTCACA 1198
BSNT_04649___ 1202 GCGGCCTCGGCGGAACGGGTGATGTTGCCATTTTATCGGCATCAGGAAGA 1251
||||.||||||||.|||||.||.||.||||||.|.|||||.|||||..|.
BL02543___mae 1199 GCGGTCTCGGCGGCACGGGGGACGTGGCCATTCTTTCGGCTTCAGGCCGG 1248
BSNT_04649___ 1252 ATGGGCCTTATGCCGTTTGCCCAAATTTCAACCCGTCTCGGCGGTGCAGG 1301
|||||.||.|||||||||||.|||||.|||||.|||||||||||.|||..
BL02543___mae 1249 ATGGGTCTGATGCCGTTTGCGCAAATCTCAACGCGTCTCGGCGGGGCATC 1298
BSNT_04649___ 1302 CACAGTTATT-TGCGCGACAGTGCTGCTTCGTTTTTTCACTTCATAA 1347
|||.||.||| || |||||.||..|.||..|.||.|||||.||.|||
BL02543___mae 1299 CACCGTCATTATG-GCGACCGTTTTACTGAGGTTCTTCACCTCGTAA 1344
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