Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00058 and BL02507
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:42
# Commandline: needle
# -asequence dna-align/BSNT_00058___yaaN.1.5803.seq
# -bsequence dna-align/BL02507___yaaN.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00058___yaaN-BL02507___yaaN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00058___yaaN-BL02507___yaaN.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00058___yaaN
# 2: BL02507___yaaN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1239
# Identity: 831/1239 (67.1%)
# Similarity: 831/1239 (67.1%)
# Gaps: 123/1239 ( 9.9%)
# Score: 2658.0
#
#
#=======================================
BSNT_00058___ 1 ----------ATGAACC-----GAGACCAAA---GCG---ACCTTCATAT 29
||.|||| .|.||.||| ||| |.|||.|..|
BL02507___yaa 1 ATGAGCGAATATAAACCATCGTTACACAAAACTGGCGCACAGCTTGAATT 50
BSNT_00058___ 30 AGATGAATTATTGGCAGATCCTTTTGGTGGTAACATAGAGATA---CCAG 76
.|||||.||..|..|.||||||||||| |||..|||| | ||.|
BL02507___yaa 51 TGATGATTTGCTTTCCGATCCTTTTGG-----ACAAGGAGA-AGCGCCTG 94
BSNT_00058___ 77 GTTC------GGAGGCTGTAAAA---------GCAGAGAAAGAGCAAGTA 111
.||| ||||| |||| || |||||||.
BL02507___yaa 95 TTTCCGGCGTGGAGG----AAAAACTCCGCGGGC--------AGCAAGTG 132
BSNT_00058___ 112 CGGCTTGTTGAT--GTTCTTCCTGAGGAAAACAAGGAAA-------AAGC 152
...||.|||||| |||.| ||||.||| ||| |.||
BL02507___yaa 133 AATCTGGTTGATACGTTAT--CTGAAGAA-------AAACGCCGGCAGGC 173
BSNT_00058___ 153 AATTCAGCTTGCTGGACAGATTGATCATAAAA---ATATGCAAAGCATT- 198
|.||||.||.||.|.|||||||||.|..|||| ||| |.||||||
BL02507___yaa 174 ATTTCAACTGGCCGAACAGATTGACCCGAAAAACCATA---ACAGCATTA 220
BSNT_00058___ 199 GTCT-TATACGGTTCACAAGCTCAATCTAAACTGCTGAACTTTTCTCATG 247
.||| ||| ||..|.|||||||||||.|||||..|||||||.||.||||
BL02507___yaa 221 CTCTGTAT--GGAACGCAAGCTCAATCCAAACTCTTGAACTTCTCACATG 268
BSNT_00058___ 248 ATATGATTAATCATGTTCAAAAGAAGGATGTCGGGGAGATTGGCGAAATA 297
|.|||.|..|.||.||.||||||||.||||||||.||.|||||..|..|.
BL02507___yaa 269 AGATGCTCGAGCACGTCCAAAAGAAAGATGTCGGTGAAATTGGGCAGGTT 318
BSNT_00058___ 298 CTTGGAGAGCTGATGAAAAAGCTGGAGCAAGTAAATCCTGATGATCTCCA 347
.|..|.||.||.|||||||||||.||.||.||.|..||.|||||..|..|
BL02507___yaa 319 TTAAGCGACCTCATGAAAAAGCTTGAACAGGTCAGCCCCGATGAATTGAA 368
BSNT_00058___ 348 ATCTAAGAAAAAGGG----TATTTTGGCACGCATGTTTGGAAGAGTATCA 393
|.|| ||||||.|| |.|||| |.||..||||||||||||||||.
BL02507___yaa 369 AACT--GAAAAAAGGAACTTCTTTT--CCCGTTTGTTTGGAAGAGTATCC 414
BSNT_00058___ 394 AGTTCTCTTCAAGAGGTGCTGTCTAAATACCAAAAGACCAGTGTGCAGAT 443
..||||.|||||||.|||.|.||.|..||.|||||.|||.|.|..||.||
BL02507___yaa 415 CATTCTGTTCAAGAAGTGTTATCAAGGTATCAAAAAACCGGCGCTCAAAT 464
BSNT_00058___ 444 AGACAGAATCAGCTTGAAGCTGGAGCACTCTAAAAATGCTTTAATCAGTG 493
|||.|||||||||.|.||.||.|||||.||.||||..||..|.||||.||
BL02507___yaa 465 AGATAGAATCAGCGTAAAACTTGAGCATTCCAAAAGCGCGCTGATCAATG 514
BSNT_00058___ 494 ACAACAAGCTGTTAGAGCAGTTATATGAAAAAAATAAAGAATATTTTGCC 543
|.||.|||.||.|.||.|...|.||||||||||||||||||||||.||..
BL02507___yaa 515 ATAATAAGATGCTCGAACGCCTTTATGAAAAAAATAAAGAATATTATGAG 564
BSNT_00058___ 544 GCGCTGAATGTTTATATTGCTGCAGGAGAACTGAAGCTGGAGGAATTAAA 593
||.||||||||.||||||||.||.||..|.||||||||.||.||||||||
BL02507___yaa 565 GCACTGAATGTCTATATTGCAGCCGGTCAGCTGAAGCTTGAAGAATTAAA 614
BSNT_00058___ 594 AACGAAAACAATTCCTGAACTGAAGCAACAGGCTGAATCG---AGTGATC 640
....|||||.|||||.|||.|.| ||.|| .||||| |.|||.|
BL02507___yaa 615 TCATAAAACCATTCCCGAATTAA---AAGAG---AAATCGAAAACTGAAC 658
BSNT_00058___ 641 ATAACCAAATGGCCGTTCAAGAGGTGAATGATTTAATTCAATTTGCTGAC 690
||.||||.|||||.|||||.||.||.||.|||.|.|||||.|||||.|||
BL02507___yaa 659 ATCACCATATGGCGGTTCAGGAAGTAAACGATATGATTCAGTTTGCCGAC 708
BSNT_00058___ 691 CGGTTAGATAAAAGGGTGCATGATTTGTTGCTGAGCAGGCAAGTTACAAT 740
|||.|.||.||..||||..|.|||||...|.|||||||||||.||||..|
BL02507___yaa 709 CGGCTGGAAAAGCGGGTTTACGATTTAACGTTGAGCAGGCAAATTACGCT 758
BSNT_00058___ 741 TCAAAGTGCACCGCAAATCAGGCTGATTCAAAATACAAACCAAGCGTTAG 790
.||.||.||.|||||||||.|..|||||||..|.|||||.||||.|.|.|
BL02507___yaa 759 GCAGAGCGCCCCGCAAATCCGTTTGATTCAGCACACAAATCAAGTGCTGG 808
BSNT_00058___ 791 CTGAAAAGATTCAGTCATCCATTGTGACAGCGATTCCGTTATGGAAAAAT 840
|.|||||||||||.||.||.|||.|||||||.||.||..|.||||||||.
BL02507___yaa 809 CGGAAAAGATTCAATCTTCGATTATGACAGCAATCCCTCTTTGGAAAAAC 858
BSNT_00058___ 841 CAAGTTGCCATTGCGCTGACGCTTTTAAGGCAGCGCAATGCAGTGGATGC 890
||.|||||.||||||||.||.||.||.|||||||||...|||||.||.||
BL02507___yaa 859 CAGGTTGCTATTGCGCTCACCCTGTTGAGGCAGCGCCGAGCAGTAGAGGC 908
BSNT_00058___ 891 ACAACAGAAAGTATCTGATACAACCAATGAGCTTTTGCTGAAAAATGCGG 940
.|||.|..|.||.||.|..|||||.||.||.||..|..||||||||||.|
BL02507___yaa 909 TCAAAAACAGGTGTCGGCCACAACAAACGAACTGCTCTTGAAAAATGCCG 958
BSNT_00058___ 941 AGCTTTTAAAAACCAATACAATTGAAACTGCACGGGCAAATGAAAGAGGC 990
||.|..|.||..|||||||.||.|||||.|||..||.|||||||.|||||
BL02507___yaa 959 AGATGCTGAAGGCCAATACGATCGAAACGGCAAAGGAAAATGAACGAGGC 1008
BSNT_00058___ 991 CTTGTTGATATAGATACCTTGAAGAAGGTGCAGGA-AAGCTTAATAAGCA 1039
.||.|||||||.||.||.|||||..|.|||||||| ||.| |.||..|.|
BL02507___yaa 1009 TTTATTGATATTGAAACATTGAAACAAGTGCAGGACAATC-TGATCGGTA 1057
BSNT_00058___ 1040 CGCTTGAAGAAACACTGACTATACAAGAAGAAGGACGAATCAAA-CGCCG 1088
|.|||||.||.||.||.|..||.|||||.|||||.|| .||||| ||.|.
BL02507___yaa 1058 CACTTGAGGAGACGCTTAAAATTCAAGAGGAAGGCCG-TTCAAAGCGGCT 1106
BSNT_00058___ 1089 TCAGGCAGAAGAAGAGCTCATGATGATGGAAGGCGACCTGAAGCAAAAGC 1138
.||||||||||||||..|.|.|...|||||||..|..||.|||...||||
BL02507___yaa 1107 GCAGGCAGAAGAAGAAATAAGGGCAATGGAAGATGGTCTCAAGGCTAAGC 1156
BSNT_00058___ 1139 TGCT-TACAATAAAGGAAA--------GATAG------- 1161
|||| .|||..||||.||| | |||
BL02507___yaa 1157 TGCTGGACATGAAAGAAAACCAAAACCG-TAGATCATAA 1194
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