Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03412 and BL02222
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:22
# Commandline: needle
# -asequence dna-align/BSNT_03412___sleB.1.5803.seq
# -bsequence dna-align/BL02222___sleB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03412___sleB-BL02222___sleB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03412___sleB-BL02222___sleB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03412___sleB
# 2: BL02222___sleB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1007
# Identity: 683/1007 (67.8%)
# Similarity: 683/1007 (67.8%)
# Gaps: 130/1007 (12.9%)
# Score: 2289.0
#
#
#=======================================
BSNT_03412___ 1 ATGAAGTCCAAAGGATCGATTATG---GCATGTCTCATCCTTTTTTCCTT 47
||||||||.|||||.|| .||.|| |.||| ||||..|.|.|.||.|
BL02222___sle 1 ATGAAGTCGAAAGGTTC-TTTTTGTTTGAATG--TCATTTTATGTACCAT 47
BSNT_03412___ 48 TACAATAACGACGTTTTTCAAT-------ACTGAAACCATCTCTGCCTTT 90
||....|||.| ||.|||||.| |.|.|||..|.|.||||||||
BL02222___sle 48 TATGGCAACCA-GTCTTTCACTTCCATTCAGTCAAAAAAGCGCTGCCTTT 96
BSNT_03412___ 91 TC-GAATCAGGTCATTCAAAGAGGGGCAACCGGGGACGATGTGGTCGAAC 139
|| ||| |||||.||.||..|.|||||.||.|||||.||||||.|.||||
BL02222___sle 97 TCTGAA-CAGGTAATACAGCGGGGGGCGACAGGGGATGATGTGATTGAAC 145
BSNT_03412___ 140 TTCAGGCGCGTCTTCAATACAACGGATATTATAACGGAAAAATTGACGGG 189
|.|||||..|.|||||||||||.||.|||||.||.||.|.|||||||||.
BL02222___sle 146 TGCAGGCAAGACTTCAATACAATGGCTATTACAATGGCAGAATTGACGGA 195
BSNT_03412___ 190 GTTTATGGATGGGGGACGTACTGGGCAGTTCGGAATTTTCAGGATCAATT 239
||.||.||.||||.|||.||||||||.||.||.|||||.||..||||.||
BL02222___sle 196 GTATACGGGTGGGCGACATACTGGGCCGTCCGCAATTTCCAAAATCAGTT 245
BSNT_03412___ 240 CGGGTTAAAAGAGGTTGACGGCCTTGTAGGAGCTAAAACAAAGCAAACCT 289
|||.||||..||....||||||||.||.||..|.||||||||.|.|...|
BL02222___sle 246 CGGCTTAAGGGATACAGACGGCCTGGTCGGGCCGAAAACAAAACGATTAT 295
BSNT_03412___ 290 TAATATGTAAATCA----AAATACTATCGTGAATATGT-CATGGAACAAC 334
||| |.||||| |||||.||..|.||.||.|| ||..| |||.|
BL02222___sle 296 TAA----TCAATCATACTAAATATTACAGCGACTACGTGCACAG-ACAGC 340
BSNT_03412___ 335 -TCAATAAAGGGAATACATTCACGCATTACGGAAAAATTCCGCTAAAGTA 383
||.| |||||.||...|||.||.||||||||.....|.|||||.|||||
BL02222___sle 341 TTCGA-AAAGGAAACCAATTTACACATTACGGCGGGCTGCCGCTGAAGTA 389
BSNT_03412___ 384 TCAGACGAAACCATCAAAA-----GCAGCAACACAAAAGGCAAGACAACA 428
|||||||||.||.|||||| ||||||.| ||||.|||.||.|
BL02222___sle 390 TCAGACGAAGCCTTCAAAAGAAGTGCAGCAGC-----AGGCGAGAAAAAA 434
BSNT_03412___ 429 AGCAGAAGCA------CGGCAG---------------------------A 445
.||.|||||| |||||| |
BL02222___sle 435 GGCGGAAGCAAGACAGCGGCAGGGCGCACAACAGCAGGGTACCGCCCAAA 484
BSNT_03412___ 446 AACAGCCTGCGGAAAAAACAACGCAGCAG------CCT--AAAGCGAATG 487
||||||| ||.|.|||| ||||||| ||| |.|||
BL02222___sle 485 AACAGCC-GCAGCAAAA-----GCAGCAGGCCGCTCCTGCACAGC----- 523
BSNT_03412___ 488 CGAATAAAC-AGCAAAACAATACACCAGCAAAAG------------CAAG 524
||||.|||| |||| ||||.|||| ||||
BL02222___sle 524 CGAAAAAACAAGCA-----------CAGCCAAAGGCTGCACCTAAACAAG 562
BSNT_03412___ 525 ----------AAAACAGGATGCGGTAGCAGCGAACATGCCTGGTGGATTT 564
||||||||||||.||.|||||.||.|||||.||.|||||.
BL02222___sle 563 CCGCGCCTAAAAAACAGGATGCCGTTGCAGCCAATATGCCGGGCGGATTC 612
BSNT_03412___ 565 TCCAACAACGATATCAGGCTGCTTGCTCAAGCGGTTTATGGCGAAGCCCG 614
||.||||||||.||.|..|||.|.||.|||||||||||.||.|||||.||
BL02222___sle 613 TCGAACAACGACATTAATCTGTTGGCCCAAGCGGTTTACGGTGAAGCGCG 662
BSNT_03412___ 615 GGGCGAGCCGTACGAGGGACAGGTTGCTATTGCAGCAGTCATTTTAAACC 664
.||.||.|||||.||.||.||||||||..|||||||.||.||.||||||.
BL02222___sle 663 CGGAGAACCGTATGACGGCCAGGTTGCCGTTGCAGCTGTTATATTAAACA 712
BSNT_03412___ 665 GTTTGAACAGCCCGTTA--TTTCCAAATTCAGTAGCGGGGGTTATTTTTG 712
|..|..|.||||| || ||.||.|||.|.||.|||||.|||||.||||
BL02222___sle 713 GGCTCGATAGCCC--TACGTTCCCGAATACGGTGGCGGGCGTTATCTTTG 760
BSNT_03412___ 713 AGCCGCTTGCCTTCACAGCAGTAGCCGACGGACAAATTTACATGCAGCCG 762
|.||||||||.||.|||||.||.||.||||||||.|||||.|||..||||
BL02222___sle 761 AACCGCTTGCATTTACAGCTGTCGCGGACGGACAGATTTATATGACGCCG 810
BSNT_03412___ 763 AATGAAACGGCACGAGAAGCAGTGCTGGATGCCATCAATGGCTGGGACCC 812
.||||||||||...|.||||.||.||.||.||||||||.||||||||.||
BL02222___sle 811 GATGAAACGGCGAAAAAAGCCGTTCTTGACGCCATCAACGGCTGGGATCC 860
BSNT_03412___ 813 ATCAGAGGAAG-CACTTTACTACTTTAATCCGGATACGGCTACAAGTCCG 861
||||||..|.| ||| ||||||.|||||.||.||.|||||.||.||..|.
BL02222___sle 861 ATCAGAAAATGCCAC-TTACTATTTTAACCCTGACACGGCCACTAGCTCA 909
BSNT_03412___ 862 TGGATTTGGGGGCGTCCGCAGATTAAAAGAATCGGTAAACACATTTTCTG 911
|||||||||||..|.||.||.||||||||.||||||||||||||||||||
BL02222___sle 910 TGGATTTGGGGCAGACCTCAAATTAAAAGGATCGGTAAACACATTTTCTG 959
BSNT_03412___ 912 TGAGTAG 918
|||.||.
BL02222___sle 960 TGAATAA 966
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