Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03407 and BL02220
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:21
# Commandline: needle
# -asequence dna-align/BSNT_03407___ypfB.1.5803.seq
# -bsequence dna-align/BL02220.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03407___ypfB-BL02220.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03407___ypfB-BL02220.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03407___ypfB
# 2: BL02220
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 193
# Identity: 119/193 (61.7%)
# Similarity: 119/193 (61.7%)
# Gaps: 32/193 (16.6%)
# Score: 325.5
#
#
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BSNT_03407___ 1 ATGAAAACATTTGAACGGCTGCTGATCAAATTATTGT----------TCA 40
|||||||||.|.||||||.| |||||| | ||.
BL02220 1 ATGAAAACAATCGAACGGTT---------ATTATT-TAAGATACTCGTCG 40
BSNT_03407___ 41 TTCAGGCCATCATTTTACTTGGTGTCCAATTTCTTTTTCACTATCAGCAT 90
|.|||.|..||||||||.|..|.||.||..|||||||||| |.||..||
BL02220 41 TACAGACGGTCATTTTAATCAGCGTGCAGCTTCTTTTTCA-TTTCTCCA- 88
BSNT_03407___ 91 A--TTGAACCATACGTATCAAAAGTGATTCAATATGAAGGGGTGGATAAC 138
| .|||.||.||..|.|||||.||..|.||.||||||||.|||.|.|||
BL02220 89 AGGCTGAGCCTTATCTGTCAAAGGTCGTGCAGTATGAAGGCGTGAACAAC 138
BSNT_03407___ 139 ATGGA----GGGGGACAATAAGATTGAAACCTTCAAACATTAA 177
|||.| ||.| ||| .|||.||.||.||.||.|..|||
BL02220 139 ATGAAAATCGGCG---AAT-GGATCGAGACATTTAAGCCGTAA 177
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