Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04827 and BL01931
See
Amino acid alignment /
Visit
BSNT_04827 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:02
# Commandline: needle
# -asequence dna-align/BSNT_04827.1.5803.seq
# -bsequence dna-align/BL01931.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04827-BL01931.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04827-BL01931.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04827
# 2: BL01931
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 918
# Identity: 326/918 (35.5%)
# Similarity: 326/918 (35.5%)
# Gaps: 498/918 (54.2%)
# Score: 593.5
#
#
#=======================================
BSNT_04827 0 -------------------------------------------------- 0
BL01931 1 ATGAGAAGGAAATTCGGACCTTTAACGATACTGGAATATATATGCCTTGT 50
BSNT_04827 0 -------------------------------------------------- 0
BL01931 51 TTTGCTGGCGGCTCTGTTTATATTTCCGCTGATTTGGATGGTCGCTTCAT 100
BSNT_04827 0 -------------------------------------------------- 0
BL01931 101 CGATGAAACCGGAAGCCGATATTTACAACAATATCAGCAGCATTAAAGCG 150
BSNT_04827 1 ------------------------------------------------AT 2
.|
BL01931 151 TTTCTTCCGTCTTTTCATCCGTCGGAATGGTTTCAATCCTACAGGGAAGT 200
BSNT_04827 3 GCTGACGCCGCAGGT-------------------------CAGTCT-TAT 26
||||.|.| ||| |||||| |.|
BL01931 201 GCTGTCAC----GGTTTGATTTACTAATGTATATTGGTAACAGTCTGTTT 246
BSNT_04827 27 GCCGCTTTAT------------------TCTATTATTCA-------GTC- 50
..||.|||.| || |||| ||| |.|
BL01931 247 TACGGTTTGTGTGTGGCAGCGGGAGCGGTC-ATTA-TCAACGGAATGGCG 294
BSNT_04827 51 -GCTTGGCCT---------------------GTACAATA----------- 67
||||.||.| |||.||.|
BL01931 295 GGCTTTGCATTCGCCAAGCTGCAATTCACAGGTAAAAAAGTGCTGTTTAC 344
BSNT_04827 68 CGTATTG--GGCG---TTAATCCTGCCGTATG----CGGCTT--ATCGGA 106
|.||||| |||| ||||||.||||| ||| ||..|| |||
BL01931 345 CATATTGCTGGCGCTTTTAATCGTGCCG-ATGGAAACGATTTTAATC--- 390
BSNT_04827 107 TCCCA-TTCACCAT----------------CATTTTGATCCGCTC----- 134
||.|| ||.||.|| |.|.|||||.|||.|
BL01931 391 TCGCAGTTTACAATTGTTCATAAGCTCGGACTTGTTGATACGCGCCTTGC 440
BSNT_04827 135 --TTATTTT-----------------CTTTCTAT---------TTCCAAA 156
|.||||| |||||.|| ||||.||
BL01931 441 CGTGATTTTGCCGGCGCTTGCGGGGGCTTTCAATATTTATTTGTTCCGAA 490
BSNT_04827 157 GAATT------------------GGAG------GAGGCGGCCTATTTGGA 182
|.|| |||| |||.|||||.|..||||
BL01931 491 -ACTTTTTCATGGCGATCCCGGGGGAGATGATTGAGTCGGCCAAGCTGGA 539
BSNT_04827 183 TGGGTG----TACAAGTTTTGGAGTATTTTTCAGAATTTTCTTACCGATG 228
.||.| |||| ||| ||| |||||||..|.|.||
BL01931 540 -CGGAGCAAATACA-----TGG---------CAG-ATTTTCTGGCGGGTG 573
BSNT_04827 229 A-GCGTGCCGATTT---------------------TGGTGACATCCGGCA 256
| || |||||||.| |||.||||| .|||
BL01931 574 ATGC-TGCCGATGTCCAAACCGGCTGTCGCTACGGTGGGGACAT-TGGC- 620
BSNT_04827 257 TTTTGACGGCTTACCATACATGGAATGAGTTTATGTTTGC----GATTAT 302
||||..|||| |..||||||||.|.||| ||.|| |||..|
BL01931 621 TTTTATCGGC-------AGCTGGAATGACTATAT-TTGGCCGCTGATGGT 662
BSNT_04827 303 TTTCATAGAT--GATGAGAATTTGCG--------GACCATTCCAGCCGGG 342
|||.|..||| |..|| |||||.|| |.|.|||.|||||
BL01931 663 TTTGACGGATAAGTCGA-AATTTCCGATCCAGGTGGCGATTACAGCC--- 708
BSNT_04827 343 CTGAT--GCAGTTCAGAGACGCGCTGCAGACAGACTGGGGCGTCCTGCTG 390
|| .||| ||..||..||.|..|.||..||..|| ||.||
BL01931 709 ---ATCAACAG--CACCGAGCCGGTTTATACGAACCAGG------TGATG 747
BSNT_04827 391 GCGGGGTTAACGATTTCAGCCGCGC-CGATT---ATTATTCT-ATTTTTA 435
||.|..||.|||||||| | ||||| .|.||||| ||.|..|
BL01931 748 GCTGTCTTGACGATTTC-------CACGATTCCGCTGATTCTGATCTACA 790
BSNT_04827 436 TTGATGCAGAA----ATATTTTGTCCGCGGGATTGC--AAGCGG--CAGT 477
|||..||..|| |.||||| .|||.|| ..|||| |||.
BL01931 791 TTGTAGCCCAACGCTACATTTT-------AGATGGCCTGGGCGGTTCAGG 833
BSNT_04827 478 GTAAAAGG-ATAA----- 489
| |.||| ||.|
BL01931 834 G--ACAGGCATCAAATAG 849
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.