Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00525 and BL01894
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:09
# Commandline: needle
# -asequence dna-align/BSNT_00525___yceI.1.5803.seq
# -bsequence dna-align/BL01894___yceI.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00525___yceI-BL01894___yceI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00525___yceI-BL01894___yceI.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00525___yceI
# 2: BL01894___yceI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1262
# Identity: 877/1262 (69.5%)
# Similarity: 877/1262 (69.5%)
# Gaps: 118/1262 ( 9.4%)
# Score: 2946.0
#
#
#=======================================
BSNT_00525___ 1 ATGGGAAAACAACAG-CCTATATCCCAGCGTAAACTGCTGGGCGTCGCCG 49
||| ||.|||.| |||.|.||..||||.|.||||||.|||.||||.|
BL01894___yce 1 ATG----AAGAACCGTCCTGTTTCAGAGCGCAGACTGCTTGGCATCGCAG 46
BSNT_00525___ 50 GTTTGGGGTGGCTGTTTGATGCAATGGATGTCGGAATATTATCGTTTATT 99
|..|.||.|||||.||||||||.|||||.||.||.|||||||||||||||
BL01894___yce 47 GCCTCGGCTGGCTTTTTGATGCCATGGACGTTGGTATATTATCGTTTATT 96
BSNT_00525___ 100 ATCGCCGCGCTCCATGTAGAGTGGAATCTGTCGCCCGAAGAAATGAAATG 149
||||||||..|.||.|..||.|||||..||.||||..|.|||||||..||
BL01894___yce 97 ATCGCCGCTTTGCACGCGGAATGGAAGTTGACGCCGCAGGAAATGAGCTG 146
BSNT_00525___ 150 GATCGGAAGCGTCAATTCCATCGGCATGGCTG-CGGGTGCGTTTTTGTTT 198
||||||.||||||||.||.||||||||||||| |||| ||.|||.|.|||
BL01894___yce 147 GATCGGCAGCGTCAACTCAATCGGCATGGCTGTCGGG-GCATTTGTCTTT 195
BSNT_00525___ 199 GG---TTTGCTTGCTGATCGAATCGGCCGCAAAAAAGTGTTCATCATCAC 245
|| |||| |||||.||..||||..|.|||.|.||.||.||.||.||
BL01894___yce 196 GGCCTTTTG---GCTGACCGCGTCGGAAGAAAATATGTTTTTATTATTAC 242
BSNT_00525___ 246 CCT----TTTATGCTTTTCCATCGGAAGCGGCATTTCCGCTTTTGTGACG 291
.|| ||| ||.||.|||||.|||||..|.||||||||...||||
BL01894___yce 243 GCTGCTGTTT----TTCTCGATCGGCAGCGGGTTGTCCGCTTTAACGACG 288
BSNT_00525___ 292 AGCTTATCGGCATTTCTAATCCTTCG---TTTCGTGATTGGTATGGGACT 338
|..||.|.|||||||.||.|.||.|| ||||| |.||.|||||.||
BL01894___yce 289 ACATTGTGGGCATTTTTAGTGCTGCGCTTTTTCG---TCGGAATGGGGCT 335
BSNT_00525___ 339 TGGCGGCGAGCTTCCAGTCGCTTCAACACTCGTTTCGGAAGCGGTTGTGC 388
.||.||.||||||||||||||.||.||.|||||.||.|||.|.||||.||
BL01894___yce 336 CGGGGGAGAGCTTCCAGTCGCATCTACGCTCGTATCTGAAACCGTTGCGC 385
BSNT_00525___ 389 CTGAAAAGCGGGGCAGAGTGATTGTGCTTTTGGAAAGCTTTTGGGCCGTG 438
||||...|.||||.|||||..|.||.||..|.|||||.||.|||||..|.
BL01894___yce 386 CTGATCGGAGGGGAAGAGTCGTCGTCCTGCTCGAAAGTTTCTGGGCATTC 435
BSNT_00525___ 439 GGCTGGCTCGCAGCGGCCTTGATTTCTTACTTTGTGATACCAAGCTTCGG 488
||||||||.||.||.||..|.|||||.||.|||.|.||.||...||.|||
BL01894___yce 436 GGCTGGCTGGCTGCAGCGCTCATTTCGTATTTTATTATTCCGGCCTACGG 485
BSNT_00525___ 489 CTGGCAGGCTGCACTTCTGTTAACTGCGCTGACTGCTTTTTATGCGCTGT 538
|||||||..|||..|..||.||||||||.|..|.||||||||.||..|.|
BL01894___yce 486 CTGGCAGATTGCTTTATTGATAACTGCGATACCGGCTTTTTACGCCTTAT 535
BSNT_00525___ 539 ACCTGCGGACGAGT----CTGCCTGATTCGCCGAAATATGAATCGCTTTC 584
|..|||||| | |||||.|||||.|||||||||||...|||
BL01894___yce 536 ATTTGCGGA----TTGCCCTGCCGGATTCTCCGAAATATGAGAAGCT--- 578
BSNT_00525___ 585 TGC-CA--AAAAGAGGTCG---GTGTGGGAGAATGTAAAAAGCGTCTGG- 627
||| || |||.||.|.|| .|...|||.|||||.||||||||||||
BL01894___yce 579 TGCGCAGGAAAGGAAGCCGACCATCATGGAAAATGTGAAAAGCGTCTGGT 628
BSNT_00525___ 628 ---GCAAGACAGTATAT--ACGGCCGACCGTGATGCTGTCGCTCGTTTGG 672
|||| |||| .|||||.||.|..|||||||.|.||||.|||
BL01894___yce 629 CCCGCAA------ATATGCCCGGCCTACGGCCATGCTGTGGATCGTCTGG 672
BSNT_00525___ 673 TTCTGTGTGGTGTTTTCTTATTACGGCATGTTCCTATGGCTGCCGAGTGT 722
||.||.||.||.|||||.||.||.||||||||.||.|||||||||||.||
BL01894___yce 673 TTTTGCGTCGTCTTTTCCTACTATGGCATGTTTCTTTGGCTGCCGAGCGT 722
BSNT_00525___ 723 CATGCTGCTGAAAGGCTTCAGCATGATTCAA-AGCTTTGAATATGTCCTG 771
||||.||.|||||||.|||||||||| |||| ||||||||.||.||||||
BL01894___yce 723 CATGGTGATGAAAGGATTCAGCATGA-TCAAGAGCTTTGAGTACGTCCTG 771
BSNT_00525___ 772 CTGATGACGCTTGCTCAGCTACCGGGCTATTTCTCTGCCGCATGGCTGAT 821
.|.||||||||.||||||||.||.|||||||||||.||.|||||||||||
BL01894___yce 772 ATTATGACGCTGGCTCAGCTGCCCGGCTATTTCTCCGCGGCATGGCTGAT 821
BSNT_00525___ 822 TGAAAAAGCGGGCCGAAA----GTGGATACTCGTCATTTACTTGATTGGT 867
|||||||||.||.||.|| |||..||| |||| ||||||.|.||.
BL01894___yce 822 TGAAAAAGCCGGTCGGAAAATGGTGCTTAC-CGTC---TACTTGCTGGGG 867
BSNT_00525___ 868 ACAGCAGGAAGCGCCTATTTCTTCGGAACGGCGGATTC-CTTAAGTCTTC 916
||.||.|..||||||||.|||||||||.||||.||.|| ||...| |||.
BL01894___yce 868 ACGGCTGTCAGCGCCTACTTCTTCGGATCGGCTGAATCGCTGGCG-CTTT 916
BSNT_00525___ 917 TGCTTACGGCTGGAATGCTGTTATCGTTTTTCAACCTCGGTGCATGGGGC 966
|||||..|.|.||.|||.|.|||||.|||||||||||.|||||.|||||.
BL01894___yce 917 TGCTTGTGTCAGGCATGTTTTTATCATTTTTCAACCTTGGTGCGTGGGGT 966
BSNT_00525___ 967 GTGCTGTATGCGTATACCCCGGAGCAATACCCGACTGCGATTCGAGCAAC 1016
|.|||.||.||.|||||||||||.|||||||||||..|.||..|.|..||
BL01894___yce 967 GCGCTTTACGCTTATACCCCGGAACAATACCCGACGTCAATCAGGGGGAC 1016
BSNT_00525___ 1017 AGGTTCAGGAACGACAGCAGCGTTTGGAAGAATCGGCGGCTTCTTCGGGC 1066
.||..||||||.|.||||.|..|||||..|||||||||||.||.|.||.|
BL01894___yce 1017 CGGCGCAGGAATGGCAGCCGGCTTTGGCCGAATCGGCGGCATCCTGGGCC 1066
BSNT_00525___ 1067 CTTTGCTCGTTGGAACGCTCGCAGCCCG----TCATTTTTCGTTTTCGGT 1112
|..|.||.||.||....||||..||||| .|| ..|.||||..|
BL01894___yce 1067 CGCTTCTTGTCGGCTATCTCGTCGCCCGGGGAACA----GAGATTTCAAT 1112
BSNT_00525___ 1113 CATCTTTTCAATCTTTTGCATTGCAATCTTACTCGCGGTTGCTTG----- 1157
.|||||||..|||||.|||| ||||.|||| |||
BL01894___yce 1113 GATCTTTTTCATCTTCTGCA------------TCGCCGTTG-TTGCGGCC 1149
BSNT_00525___ 1158 -------------TATTTTGATTATGGGGAAAGAAACGAAACAAACTGAG 1194
|.|||| ||||||..||.|||||.||.|..|||
BL01894___yce 1150 GTCGCAGCCATCATCTTTT-----TGGGGACCGAGACGAAGCAGAAAGAG 1194
BSNT_00525___ 1195 CTAG---AATAG 1203
||.| ||
BL01894___yce 1195 CTTGCCTAA--- 1203
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