Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00677 and BL01760
See
Amino acid alignment /
Visit
BSNT_00677 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:18
# Commandline: needle
# -asequence dna-align/BSNT_00677___yclQ.1.5803.seq
# -bsequence dna-align/BL01760___yclQ.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00677___yclQ-BL01760___yclQ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00677___yclQ-BL01760___yclQ.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00677___yclQ
# 2: BL01760___yclQ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1027
# Identity: 655/1027 (63.8%)
# Similarity: 655/1027 (63.8%)
# Gaps: 152/1027 (14.8%)
# Score: 1863.0
#
#
#=======================================
BSNT_00677___ 1 ATGAAAAAGTTCGCATTACT-ATTCATCGCTTTGGTGACGGCAGTTGTGA 49
.|||||||..|..|.|||.| ||| ||.||.|||.|.||.|...||||..
BL01760___ycl 1 TTGAAAAAACTATCTTTATTGATT-ATGGCATTGATAACCGTTCTTGTCG 49
BSNT_00677___ 50 TTTCTGCATGCGGAAACCAAAGC-----ACA-AGCAGCAAAGGTTCTGAT 93
|..|.||.|||||||| |||||| ||| ||..||||| .|||...
BL01760___ycl 50 TAGCCGCCTGCGGAAA-CAAAGCTGCTGACACAGATGCAAA--ATCTTCC 96
BSNT_00677___ 94 TCTAAGGAAGAACAAATCACGGTGAAACAC--CAGCTGGACAAAAACGGA 141
|||||..|||||....||||..|.|||||| |||| |||| .|
BL01760___ycl 97 TCTAAAAAAGAAACCGTCACAATTAAACACAACAGC--GACA------CA 138
BSNT_00677___ 142 ACAAAAGTACCGAAGAGCCCTAAAAAAGTTGTCGTATTTGACTTTGGAA- 190
|||.|.||||||||.|.|||.||||||||.||.||.||..|.|||||||
BL01760___ycl 139 ACAGATGTACCGAAAAACCCGAAAAAAGTCGTTGTCTTCAATTTTGGAAT 188
BSNT_00677___ 191 GCTTAGATACACTAGATAAACTTGGTCTTGATGATAAA--------GTAG 232
|||| ||.||.||.|||.|.||||| ||| || ||.|
BL01760___ycl 189 GCTT-GACACGCTTGATGAGCTTGG-CTT-------AAGCGACCGCGTTG 229
BSNT_00677___ 233 CGGGACTGCCGAAACAAGCCCTTCCTAAATATCTGTCCAAATTCAAGGAT 282
..||.||.|||||||||.|||||||....||..||...||||..||.||.
BL01760___ycl 230 TCGGCCTTCCGAAACAAACCCTTCCGTCTTACTTGAAAAAATATAAAGAC 279
BSNT_00677___ 283 GACAAATATGCTGACGTCGGAAGCTTAAAAGAGCCAGACTTCGAGAAAGT 332
..|||||.||....||||||..|..|||||||||||||.||.||.|||.|
BL01760___ycl 280 AGCAAATTTGAAAGCGTCGGCGGACTAAAAGAGCCAGATTTTGAAAAAAT 329
BSNT_00677___ 333 GGCAGATTTAGACCCTGACTTGATCATTATCTCAGGAAGACAATCT---- 378
.||.||..|.||.|||||.||||||||.|||..|||.|||||.|||
BL01760___ycl 330 TGCTGAGCTTGAGCCTGATTTGATCATCATCGAAGGCAGACAGTCTGAAC 379
BSNT_00677___ 379 --------GAGTCTTACAAAGAATTCTCTGAAATTGCGCCGACAATTTAC 420
|||| |||.|||| ||.||.|||||.||..||
BL01760___ycl 380 AGTATGACGAGT-TTAAAAAG-----------ATCGCTCCGACGATCGAC 417
BSNT_00677___ 421 CTTG-GCGTAGACACAG-CGAAGTATATGGAATCA--TTTAAGTCTGACG 466
.||| || |.||| ||| .|||.||.||| |.|| |||||
BL01760___ycl 418 ATTGAGC-TTGAC-CAGAAGAACTACATG--AACAGTTTTAA-------- 455
BSNT_00677___ 467 CAGAAACA----------ATCGGTAAGATCTTCGATAAAGAAGATGAAGT 506
||||| | ||.||.||.|||||||..||||||||||..||
BL01760___ycl 456 -AGAAA-ATACCGAAAACATTGGAAAAATCTTCGGCAAAGAAGATGCTGT 503
BSNT_00677___ 507 GAAGGATGAACTCGCAAAAATCGATCATTCAATCGCAGATGTAAAGAAAA 556
.||.||.|..||.||.||||||||| |.|.|.|||.|||||
BL01760___ycl 504 CAAAGAAGCCCTTGCGAAAATCGAT---------GAAAAAGTAGAGAAA- 543
BSNT_00677___ 557 CGGCTGAAAAGCT----TAACAAAAA--CGGTC-------TCGTCATCAT 593
||..|.||||| .||.||||| ||| | |.|||.||.|
BL01760___ycl 544 --GCCAACAAGCTGGCGAAAGAAAAAGGCGG-CAAAGGATTGGTCGTCTT 590
BSNT_00677___ 594 GGCGAACGA-CGGGAAG---ATCAGCGCATTCGGTCCTAAA-----TCAA 634
||||| ||..||| ||||||||.|..|| || ||||
BL01760___ycl 591 ----AACGAGCGATAAGCAAATCAGCGCGTATGG-----AAGCGGCTCAA 631
BSNT_00677___ 635 GATACGGCCTGATCCATGACGTGTTCGGCG-TGACACCGGCTGATAAAAA 683
|||.||||.|||||||.||.|||.|||||| ||| |||.|..||||||||
BL01760___ycl 632 GATTCGGCTTGATCCACGATGTGCTCGGCGTTGA-ACCTGTCGATAAAAA 680
BSNT_00677___ 684 CATCAAAGCGTCTACTCACGGACAAAGCGTTTCTTACGAGTACATTTCAA 733
||||.|.|..||...||||||.||||||||.||||..||.||.||.||..
BL01760___ycl 681 CATCGAGGTTTCCCTTCACGGCCAAAGCGTCTCTTCAGAATATATCTCTG 730
BSNT_00677___ 734 AAACAAACCCGGATTACCTGTTTGTCATTGACCGCGGTACAGCGATCGGT 783
|||..||.||.|||||||||||||||||.|||||..|..|.||.|||||.
BL01760___ycl 731 AAAAGAATCCTGATTACCTGTTTGTCATCGACCGAAGCGCTGCCATCGGC 780
BSNT_00677___ 784 GAAACATCATCTACTAAACAAGTCGTTGAAAATGATTATGTGAAAAAT-- 831
||||.|..|.|..|.|||.|||||.|.|||||||| |..||.|||||
BL01760___ycl 781 GAAAAAGGAACAGCAAAAGAAGTCATCGAAAATGA--AATTGTAAAATCA 828
BSNT_00677___ 832 GTAAACGCAGTGAAAAATGATCATGTCGTCTACCTTGATTC-TGCTACTT 880
..|||.||....|||||.|..|||.||...|||||||||.| .||||| |
BL01760___ycl 829 ACAAAGGCCTATAAAAACGGCCATATCACATACCTTGATCCAGGCTAC-T 877
BSNT_00677___ 881 GGTACTTATCAGGAGGCGGTCTTGAGTC--TATGGCACAAATGATCAAAG 928
|||||.|.|||||.||.||.|||||.|| ||| |..|||||.|.||||
BL01760___ycl 878 GGTACCTGTCAGGCGGAGGCCTTGAATCCGTAT--CTGAAATGGTGAAAG 925
BSNT_00677___ 929 AAGT-GAAAGACGGTTTAGAGAAGTAA 954
|||| |||| |.||.|| |||.|||
BL01760___ycl 926 AAGTCGAAA-ATGGATT---GAAATAA 948
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.