Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00660 and BL01751
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:17
# Commandline: needle
# -asequence dna-align/BSNT_00660___gerKA.1.5803.seq
# -bsequence dna-align/BL01751___gerKA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00660___gerKA-BL01751___gerKA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00660___gerKA-BL01751___gerKA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00660___gerKA
# 2: BL01751___gerKA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1744
# Identity: 1088/1744 (62.4%)
# Similarity: 1088/1744 (62.4%)
# Gaps: 263/1744 (15.1%)
# Score: 3216.5
#
#
#=======================================
BSNT_00660___ 1 ATGCCTTTATTTTCTAAGCGAAAGAACAATACCGGTTCAAAAGACAAGCA 50
|..|||.
BL01751___ger 1 -------------------------------------------ATGAGCG 7
BSNT_00660___ 51 GAATACTGACGAAAGGAACCAGGAACAGCAGCAAGAAAAAGAAAGGCCGG 100
|| ||.|.|||||.|||| |.| |.||| |
BL01751___ger 8 GA--------GATAAGAACCCGGAA----ACC--GTAAA----------G 33
BSNT_00660___ 101 TTCTC---ATTTCTCCAAGT---TTG---GCAAAGAATATAGCGGAAAC- 140
||.|| .|||.|.| || ||| || ||.||||
BL01751___ger 34 TTGTCTGGGTTTGTGC--GTCCCTTGCTTGC-----------CGAAAACC 70
BSNT_00660___ 141 -------GAAAAAGGAAGT---CGGAAGCAGCTCTGACGTCATCATTCGC 180
||..||.|||.| |||||.||||||.||..|..||||.|||
BL01751___ger 71 TGAGCCTGATTAAAGAAATGACCGGAAACAGCTCCGATATTGTCATCCGC 120
BSNT_00660___ 181 GAGATTAAAATCGGGGAGCAGG-------ATCATGTCCACCTAGCTGTTA 223
.|| ||||||.| |||.||.|| || || |..||||.||..
BL01751___ger 121 AAG-TTAAAAAC-GGGCGCTGGCGAAAAAAT--TG---AAATAGCCGTCG 163
BSNT_00660___ 224 TCTATATTGCTGGGCTGGTCGATAATAACACGATCCATGAGTCGTT---- 269
|.|||.|.|..||..|....|||.|.||..||||.||.||.|..||
BL01751___ger 164 TTTATGTCGGCGGCATTACAGATGAGAAAGCGATTCACGATTTTTTGCTG 213
BSNT_00660___ 270 -AATTGACCCATTGGTACAGGATGAGTCTA-TCC--AGAATACTCAT-GC 314
|||.||.| |||| | ||| ||||| | ||
BL01751___ger 214 GAATCGATC------------ATGA----ACTCCGAAGAAT-----TGGC 242
BSNT_00660___ 315 GATCCAGCAAA-----------------TTCTTGAAA-------AAACGC 340
| |.||| |||||||.| |...|.
BL01751___ger 243 G-----GAAAAGGAGTACGGCAGGGAGGTTCTTGAGACGATTGCAGGTGA 287
BSNT_00660___ 341 TCCCG-----CTGGGCGGGGT-GAAAGCGGAAAAGAGCTGGGACAA---G 381
|.||| ||||||||.|| |||| ..||||||.|.|.|||||| |
BL01751___ger 288 TGCCGTTGCACTGGGCGGTGTCGAAA-AAGAAAAGCGGTTGGACAAAGTG 336
BSNT_00660___ 382 CTTTTTTCCGAGTTAATGCTCGGCAATGCGCTCATTTTTGCTGATG---- 427
|||...|| .||.|||...||.|||.||.|||||||.||.||.|
BL01751___ger 337 CTTGAATC---TTTGATGGCAGGAAATACGATCATTTTGGCAGAGGAGAC 383
BSNT_00660___ 428 GCCATGATGAAGCTTTGATTTGCAGCACTCAAGGGGGAGAGCAGCGCTCC 477
|.|| ||||||.|.|||...|.|||..||||.|||||..|||||||.
BL01751___ger 384 GGCA----GAAGCTGTTATTACGACCACGAAAGGCGGAGAAAAGCGCTCG 429
BSNT_00660___ 478 ATCCAAGAGCC-GAGCACC--CAGGCGTCATTCCGCGGTCCGCGCCAAGG 524
|||.|.||||| ||..|.| |||| |||||||||||.|.||..||||
BL01751___ger 430 ATCAAGGAGCCTGAAAATCAGCAGG---CATTCCGCGGTTCACGTGAAGG 476
BSNT_00660___ 525 GTTTACAGAGTCTCTGCAAACCAATATTTCCATGATCCGGCGATACATTA 574
.||||..||..|.||..|.||.||||||||..||.|.||..||...||||
BL01751___ger 477 ATTTATCGAAGCGCTCGACACGAATATTTCTTTGGTGCGCAGAATTATTA 526
BSNT_00660___ 575 AAAATCCGAATTTATGGGTTGAAAAAATGAAAA----AAGGTTCTGTTAC 620
||||.||||||.|.|||||||||||||.||..| ||| .||.||
BL01751___ger 527 AAAACCCGAATCTTTGGGTTGAAAAAACGACGATGGGAAG----CGTCAC 572
BSNT_00660___ 621 GAATACGGATATCGCTCTCATGTACATTCAA-GGAATATGCGATAAAAAG 669
.||.||.|||.|.||..|||||||.| |||| |||||||||||....||.
BL01751___ger 573 AAAAACCGATGTGGCGATCATGTATA-TCAATGGAATATGCGACCCGAAA 621
BSNT_00660___ 670 GTGCTGAAGGAAGTGAAGCTGCGCCTGGAAAAAATAGATATTGACAGTAT 719
|.|.||||.|||||.||.....|..||||||..||.||.||.|||||.||
BL01751___ger 622 GCGGTGAAAGAAGTCAAAAAAAGGATGGAAAGCATTGAGATCGACAGCAT 671
BSNT_00660___ 720 TTTGGAATCTGGATATATTGAGCAGCTGATTGAAGATGAAACC---TTTA 766
..|.|||||.||.||.|||||.|||.|.|||||| ||.||| ||||
BL01751___ger 672 CCTTGAATCGGGCTACATTGAACAGTTTATTGAA---GACACCGTATTTA 718
BSNT_00660___ 767 CGACGTTTCCGACTATGTATCATACAGAACGCCCTGATGTAGTAGCGGGT 816
||||.||||||||..|.||||||||.|||.|.||.|||.|.||.||.||.
BL01751___ger 719 CGACCTTTCCGACGGTATATCATACTGAAAGGCCGGATATGGTCGCAGGG 768
BSNT_00660___ 817 AATCTGTTAGAAGGAAGATTCGCGATTATTGTGGACGGAACACCGTTTGT 866
||||||.|.|||||||||.||||.||..||||.|||||.|||||||||||
BL01751___ger 769 AATCTGCTTGAAGGAAGAATCGCCATCTTTGTTGACGGTACACCGTTTGT 818
BSNT_00660___ 867 GCTTATTGCCCCGGCCTTATTTGTCCAGTTTTTTCAGTCTGTTGAGGATT 916
.||..|||.|||.|||.|.|||.|.||.||||||||.|||||||||||||
BL01751___ger 819 CCTGCTTGTCCCTGCCGTTTTTATTCAATTTTTTCAATCTGTTGAGGATT 868
BSNT_00660___ 917 ATTATTCGCGTTTTGACATTGCGACAAGTATAAGAATTCTTCGTGTTTTA 966
|.|||||.||.|||||||||||||||...||..|..||.|.||.||.||.
BL01751___ger 869 ACTATTCACGCTTTGACATTGCGACATTCATCCGCTTTTTGCGCGTATTG 918
BSNT_00660___ 967 GTCTTTTTCATTTCGCTTGTGGCTCCGGCTGTATACGTGGCAGCCACGAC 1016
.||||.||.||||||||..|.||.||.||.||.|||||.|..||.|||||
BL01751___ger 919 ATCTTCTTTATTTCGCTGATTGCGCCTGCCGTCTACGTCGGTGCGACGAC 968
BSNT_00660___ 1017 GTTTCATCAA-GAAATGATACCGACTGAGCTGTTAGTGGTCATTGCGGCC 1065
.||||| ||| ||||||||.|||||.|||||.||.||.||.|||||.||.
BL01751___ger 969 TTTTCA-CAAGGAAATGATCCCGACGGAGCTTTTGGTCGTAATTGCCGCG 1017
BSNT_00660___ 1066 CAGCGGGAAAGTGTCCCGTTTCCGGCTGTTGTGGAGGCGCTGACGATGGA 1115
|||||.||||..||.|||||.||||||||.||.||.||..|||..|||||
BL01751___ger 1018 CAGCGTGAAATCGTGCCGTTCCCGGCTGTGGTCGAAGCCATGATCATGGA 1067
BSNT_00660___ 1116 GGTTGCTTTTGAGATTCTGAGGGAAGCGGGATTCAGGCTGCC----CCGG 1161
..||.|.|||||.|||.||.||||.|||||..||.||||.|| .||
BL01751___ger 1068 AATTTCGTTTGAAATTTTGCGGGAGGCGGGCATCCGGCTTCCGAAAGCG- 1116
BSNT_00660___ 1162 GTTGTTGGCTCGGCAGTGTCAATCGTAGGCGCGCTCGTAATCGGCCAGGC 1211
.|.||.||.||.||.||.||.||.||.||..|.||.||.||.|||||
BL01751___ger 1117 ---ATAGGTTCAGCCGTTTCGATTGTGGGAGCCATTGTCATTGGGCAGGC 1163
BSNT_00660___ 1212 TGCCGTACAGGCTGGTATCGTCTCTCCGGCAATGGTGATTATCGTGGCAC 1261
.||.||.|||||.||.||.||.||.|||||.|||||.||.|||||.||..
BL01751___ger 1164 GGCGGTTCAGGCCGGGATTGTGTCGCCGGCGATGGTCATCATCGTAGCGA 1213
BSNT_00660___ 1262 TCACCGCGATTGCGAGCTTCGCAACCCCGGCGTTTGCAATGGCGATTTCA 1311
||||.||||||.|.||.||.||.||.||..|.||..|.|||||||||||.
BL01751___ger 1214 TCACAGCGATTTCAAGTTTTGCTACACCTTCTTTCTCCATGGCGATTTCC 1263
BSNT_00660___ 1312 GCCCGGCTTATTCGGTTTATTTTTCTTATT-GCCTCAGCTGTTATGGGTT 1360
||||||||..|.|||||| ||.|||.|||| |||.|.||....|.|||||
BL01751___ger 1264 GCCCGGCTCGTCCGGTTT-TTCTTCATATTAGCCGCGGCGACGACGGGTT 1312
BSNT_00660___ 1361 TTTACGGGCTGATTTTAGGGATCATTATGATGTTTGTCCACTTATGCAGT 1410
|||||||..|.|||.|.||..|.||.||.|||||||||||.||||||||.
BL01751___ger 1313 TTTACGGCATTATTCTTGGACTGATCATCATGTTTGTCCATTTATGCAGC 1362
BSNT_00660___ 1411 CTTCGTTCATACGGCGTTCCATATATGTCGCCGCTTGCACCCTTT-TCTT 1459
||.|||||.|.|||.||||||||||||.|.||..||||.||.||| |.||
BL01751___ger 1363 CTGCGTTCCTTCGGTGTTCCATATATGACTCCTTTTGCGCCGTTTATTTT 1412
BSNT_00660___ 1460 CACAA-----GGCGTAAAGGACACGC--TTTTCCGGGTTCCGTGGTGGGC 1502
.|.|| |||| |||| |..|.||..|.||.||||||.|
BL01751___ger 1413 GAAAAACTGGGGCG--------ACGCCATCGTTCGTCTGCCTTGGTGGAC 1454
BSNT_00660___ 1503 CGATGAAAAAAGGCCGGAATCGGTCAGCAAGGAAGATAAGGTGCGGCAGG 1552
..||||.||..||||.|||..|.||.||||.||..||||||||||.||.|
BL01751___ger 1455 ACATGAGAAGCGGCCTGAACTGATCGGCAATGACAATAAGGTGCGCCAAG 1504
BSNT_00660___ 1553 GGCAAGATCA-ACGCCCAGAGCCGGCCGCTTCACGAGGAATGGTG----A 1597
|..||.|.|| |..||| |||||..|.|.||||.|.|..|||..| |
BL01751___ger 1505 GAGAATACCAGAAACCC-GAGCCCCCGGATTCAGGCGATATGAAGACAAA 1553
BSNT_00660___ 1598 ACAAAGATTTGGAAGAAGGGGATAAGAATGGTACG------TAA 1635
|||| |||||.||.|||...||||..||| |||
BL01751___ger 1554 ACAA-------GAAGATGGTGATCCAAATGAAACGAATCGTTAA 1590
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