Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03663 and BL01560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:40
# Commandline: needle
# -asequence dna-align/BSNT_03663___gcvPB.1.5803.seq
# -bsequence dna-align/BL01560___gcvPB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03663___gcvPB-BL01560___gcvPB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03663___gcvPB-BL01560___gcvPB.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03663___gcvPB
# 2: BL01560___gcvPB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1470
# Identity: 1129/1470 (76.8%)
# Similarity: 1129/1470 (76.8%)
# Gaps: 15/1470 ( 1.0%)
# Score: 4276.5
#
#
#=======================================
BSNT_03663___ 1 ATGAGTAATCAGGACCAGGCACTTATTTTTGAACTTTCAAGAGAAGGCCG 50
||||.|||||||||.||..|.||||||||||||.|.||||.||||||.||
BL01560___gcv 1 ATGAATAATCAGGATCAATCGCTTATTTTTGAAGTATCAAAAGAAGGGCG 50
BSNT_03663___ 51 AATCGGCTATAGTCTGCCGGAGCTCGATGTACCGGAAATCGAATTGGGGG 100
..|||||||.||.||.||.|||||.||.||.||.||||..||..||...|
BL01560___gcv 51 GGTCGGCTACAGCCTTCCTGAGCTTGACGTCCCTGAAACAGATGTGACAG 100
BSNT_03663___ 101 ACCTC-TTGTCAGACACCTATATTCGTGACGAAGACGCAGCGCTGCCGGA 149
||.|| |||.| ||..|.|||||..|.||||||...||||..||.||.||
BL01560___gcv 101 ACGTCATTGAC-GAAGCGTATATCAGAGACGAACCGGCAGATCTCCCCGA 149
BSNT_03663___ 150 GGTTTCAGAGCTGGACATCATGCGCCATTATACAGCGCTGTCCAAACGCA 199
.||.||.|||||.||.||.||||||||||||||.||..|.||.|..||||
BL01560___gcv 150 AGTGTCCGAGCTTGATATTATGCGCCATTATACGGCTTTATCTAGGCGCA 199
BSNT_03663___ 200 ATCACGGGGTGGATTCCGGTTTTTATCCTCTCGGTTCTTGCACGATGAAA 249
|.|||||.||||||||.||.||||||||.||||||||.|||||||||||.
BL01560___gcv 200 ACCACGGAGTGGATTCGGGATTTTATCCGCTCGGTTCGTGCACGATGAAG 249
BSNT_03663___ 250 TATAATCCGAAAATCAATGAAAAAATCGCACGTATTCCTGGTTTTGCTGC 299
||.||||||||.||.||.|||||||||||..|.||.|||||.|||.||||
BL01560___gcv 250 TACAATCCGAAGATTAACGAAAAAATCGCGAGAATCCCTGGATTTTCTGC 299
BSNT_03663___ 300 GATTCATCCTCTTCAGGATGAAGACACGGTGCAAGGCGCATTAGAGCTTT 349
|||.|||||.||.||||||||||..||.|||||.||.||..|.||.||||
BL01560___gcv 300 GATCCATCCGCTCCAGGATGAAGCGACCGTGCAGGGTGCGCTGGAACTTT 349
BSNT_03663___ 350 TATATGATTTAAGCAAGCACCTTGAAGAAATAACGGGAATGGATGAGGTT 399
|.||.||.||.|||.||||..|.|||||.||.||.||||||||||||||.
BL01560___gcv 350 TGTACGACTTGAGCGAGCATTTGGAAGAGATCACAGGAATGGATGAGGTC 399
BSNT_03663___ 400 ACGCTTCAGCCTGCTGCCGGAGCGCACGGCGAATGGACGGGGCTGATGAT 449
||.||||||||.||||||||.|||||||||||.|||||.|||||||||||
BL01560___gcv 400 ACCCTTCAGCCGGCTGCCGGCGCGCACGGCGAGTGGACCGGGCTGATGAT 449
BSNT_03663___ 450 GATCCGTGCCTATCATGAAGCTCGCGGGGATTTCAAGCGGACGAAGGTCA 499
||||||.||.|..|||||.||...|||.|||...||..||||||||||.|
BL01560___gcv 450 GATCCGCGCGTTCCATGAGGCAAACGGCGATCATAAAAGGACGAAGGTTA 499
BSNT_03663___ 500 TTGTCCCTGATTCCGCGCACGGGACGAATCCTGCATCAGCGACAGTAGCA 549
||||.||||||||.||.|||||.||.|||||.||.||.|||||.||.||.
BL01560___gcv 500 TTGTTCCTGATTCGGCCCACGGTACAAATCCGGCGTCTGCGACTGTTGCC 549
BSNT_03663___ 550 GGCTTTGAAACTGTTACGGTGAAATCGAATGAAAATGGGCTTGTTGATTT 599
||.||||||||.||.||.||.|||||||||||..|.||.|||||||||.|
BL01560___gcv 550 GGATTTGAAACGGTCACCGTCAAATCGAATGACGACGGCCTTGTTGATCT 599
BSNT_03663___ 600 AGAGGATTTAAAAAGAGCAGTGAATGAAGAAACTGCAGCTCTCATGCTGA 649
.||.||||||||..|.|..||..|.|||||||||||.||..|.|||||||
BL01560___gcv 600 GGAAGATTTAAAGCGTGTCGTAGACGAAGAAACTGCCGCGTTAATGCTGA 649
BSNT_03663___ 650 CGAATCCGAACACGCTCGGCTTGTTTGAGGAGCAGATTACAGAGATGGCG 699
|.|||||.||.|||||||||.|.||||||||..|.|||..|||.|||||.
BL01560___gcv 650 CCAATCCAAATACGCTCGGCCTTTTTGAGGAAAATATTTTAGAAATGGCT 699
BSNT_03663___ 700 GAAATTGTACACCAAGCGGGGGGGAAACTGTATTATGACGGCGCTAATTT 749
|||||.||.||....||.||.||.||.|||||.||||||||.||.||..|
BL01560___gcv 700 GAAATCGTCCATAGTGCCGGAGGAAAGCTGTACTATGACGGAGCGAACCT 749
BSNT_03663___ 750 AAATGCCGTTTTAAGCAAGGCGAGACCTGGAGATATGGGATTTGACGTGG 799
.||.|||||..|.|||||.||.||.||.||.||.||||||||.|||||.|
BL01560___gcv 750 CAACGCCGTACTCAGCAAAGCAAGGCCGGGTGACATGGGATTCGACGTCG 799
BSNT_03663___ 800 TGCACCTCAACCTGCATAAAACATTCACAGGCCCTCATGGCGGCGGAGGC 849
|.||..|.||.||.||.|||||.||.||.||.||.||.||.||||||||.
BL01560___gcv 800 TCCATTTGAATCTTCACAAAACCTTTACGGGACCGCACGGAGGCGGAGGA 849
BSNT_03663___ 850 CCCGGCTCAGGCCCTGTCGGCGTAAAAAAAGATCTGATTCCTTATTTGCC 899
||.||.|||||.|||||||||||.||.||.||..||||.||.||||||||
BL01560___gcv 850 CCTGGGTCAGGTCCTGTCGGCGTTAAGAAGGAATTGATACCGTATTTGCC 899
BSNT_03663___ 900 AAAGCCAGTTTTAGTTAAAAAAGAAGGGCGCTTTACGTTTGATTATGACC 949
.|||||.||..|.||.||||||||.||.||||.|||.|||||..||||||
BL01560___gcv 900 GAAGCCGGTGCTTGTGAAAAAAGACGGACGCTATACTTTTGACCATGACC 949
BSNT_03663___ 950 GCCCTCATGCGATCGGCCGTGTGAAGCCGTATTACGGCAACTTTGGCATT 999
|.||.|||.||||||||.|.|||||.||.||.|||||.|||||.||.||.
BL01560___gcv 950 GTCCGCATTCGATCGGCAGGGTGAAACCTTACTACGGAAACTTCGGGATC 999
BSNT_03663___ 1000 AATGTGAGAGCGTATACGTATATTCGCTCCATGGGGCCTGACGGATTAAA 1049
||||||||.||.||||||||.|||||.||.||||||||.|||||..|.||
BL01560___gcv 1000 AATGTGAGGGCATATACGTACATTCGTTCAATGGGGCCGGACGGGCTCAA 1049
BSNT_03663___ 1050 GGCTGTTACTGAGAACGCAGTGTTAAACGCCAATTATATGATGAGAAAGC 1099
.|..||.||.||.|||||.||.|||||.||.|||||||||||||||||||
BL01560___gcv 1050 AGAAGTGACGGAAAACGCCGTTTTAAATGCGAATTATATGATGAGAAAGC 1099
BSNT_03663___ 1100 TCGCGCCTTATTACGATCTTCCGTTTGACCGCCATTGCAAGCATGAATTT 1149
|.||.|||||.||||||||.|||||||||||.||.|.||||||.||||||
BL01560___gcv 1100 TTGCTCCTTACTACGATCTGCCGTTTGACCGACACTCCAAGCACGAATTT 1149
BSNT_03663___ 1150 GTATTATCAGGGAA-GCGGCAGAAAAAGCTGGGAGTGCGTACGCTTGATA 1198
||..|.|| ||||| |||.|||||||||||||||||..|.||||||||.|
BL01560___gcv 1150 GTGCTGTC-GGGAAGGCGCCAGAAAAAGCTGGGAGTCAGAACGCTTGACA 1198
BSNT_03663___ 1199 TTGCAAAACGGCTCCTTGATTTCGGCTATCATCCGCCGACTATTTATTTC 1248
|||||||.||.||..|.||.|||||||..|||||||||||.||.||||||
BL01560___gcv 1199 TTGCAAAGCGCCTTTTGGACTTCGGCTTCCATCCGCCGACCATCTATTTC 1248
BSNT_03663___ 1249 CCGCTTAATGTTGAAGAATGCATCATGATCGAGCCGACGGAGACCGAATC 1298
|||||.|||||.||.||||||||||||||.||.|||||.||.||.||.||
BL01560___gcv 1249 CCGCTCAATGTCGAGGAATGCATCATGATTGAACCGACAGAAACAGAGTC 1298
BSNT_03663___ 1299 AAAGGAAACACTGGACGCGTTTATTGATGCTATGATTCAAATCGCAAAAG 1348
.||.|||||.||.||.||||||||.|||.|.|||||.||.||||||||||
BL01560___gcv 1299 GAAAGAAACGCTCGATGCGTTTATCGATACGATGATCCAGATCGCAAAAG 1348
BSNT_03663___ 1349 AAGCGGAGGAGAATCCGGAGCTTGTTCAGGAGGCCCCGCATACAACGATT 1398
||||||||||.|..||.||..|.||||||||.||.|||||||||||..||
BL01560___gcv 1349 AAGCGGAGGAAACGCCTGAAGTCGTTCAGGAAGCACCGCATACAACCGTT 1398
BSNT_03663___ 1399 GTAAAAAGAATGGATGAAACAAAAGCGGCGAGACACCCGGTGCTCAGATA 1448
||.|||.|.|||||||||||||||||.|||.|..|.||.|||||
BL01560___gcv 1399 GTGAAACGCATGGATGAAACAAAAGCTGCGCGGAAGCCCGTGCT------ 1442
BSNT_03663___ 1449 CGAGGCGGTA-GAAAGATAA 1467
|||.|| ||||.||.|
BL01560___gcv 1443 ----GCGCTATGAAAAATGA 1458
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