Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01063 and BL01298
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:34
# Commandline: needle
# -asequence dna-align/BSNT_01063___ydjG.1.5803.seq
# -bsequence dna-align/BL01298___ydjG.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01063___ydjG-BL01298___ydjG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01063___ydjG-BL01298___ydjG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01063___ydjG
# 2: BL01298___ydjG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1058
# Identity: 768/1058 (72.6%)
# Similarity: 768/1058 (72.6%)
# Gaps: 64/1058 ( 6.0%)
# Score: 2733.0
#
#
#=======================================
BSNT_01063___ 1 ATGATAATATCTTATAAGTGTCCGAACTGCGGCAGTGATATGGCATTTGA 50
|||.||||.||||||||.||||||..||||||...|||.|||||.|||||
BL01298___ydj 1 ATGGTAATTTCTTATAAATGTCCGGGCTGCGGGGATGACATGGCCTTTGA 50
BSNT_01063___ 51 CAGTGAAACCGGCTCGTTATCCTGCGGCAGCTGCGGAAGACAGGACAATA 100
|..||||.|.|||.||.|..|||||.||||||||||.|||||||||||.|
BL01298___ydj 51 CGCTGAATCGGGCACGCTCGCCTGCCGCAGCTGCGGGAGACAGGACAAGA 100
BSNT_01063___ 101 TTGAAAGCCTTCCGAAAGAA---AACATTGCGGCACGGTTTTCTGATGAT 147
||||||.|.|||||.||||| ||.|.|||| .|.|||.||||.|||
BL01298___ydj 101 TTGAAAACATTCCGGAAGAATTGAAAACTGCG---AGATTTACTGAAGAT 147
BSNT_01063___ 148 GAAGCAAAAGAATATCAATGTGAAAACTGCGGTGCCGTTTTGATCACGGA 197
|||||||.|||||||||.||..||||||||||.||..||||||||||.||
BL01298___ydj 148 GAAGCAACAGAATATCATTGCCAAAACTGCGGCGCTATTTTGATCACTGA 197
BSNT_01063___ 198 AGCTGAAACGACAGCAACGACGTGCAGCTTCTGCGGGGGTGCTGCAATAC 247
....||||||||.||.||..|.||||||||.|||||.||.||.|||.|..
BL01298___ydj 198 GAAAGAAACGACGGCTACATCCTGCAGCTTTTGCGGAGGAGCGGCAGTGA 247
BSNT_01063___ 248 TTGCCGATCGTTTATCAGGA--CATTTGGCGCCGGCGAAGGTCATTCGAT 295
|.|||||.||..|.||.||| |.|| ||.|||||.||||||||||..|
BL01298___ydj 248 TCGCCGACCGCCTGTCCGGAAGCCTT--GCTCCGGCAAAGGTCATTCCTT 295
BSNT_01063___ 296 TTACAATCAGCAAGCAAGAAGCGGAGCAGGCATTTCGAAAGTGGTGCAAA 345
||||.||||||||..|.||.||||.|.|.||.|||||.||||||||||.|
BL01298___ydj 296 TTACGATCAGCAAAGAGGAGGCGGCGGACGCGTTTCGCAAGTGGTGCAGA 345
BSNT_01063___ 346 AAAGGCCTTCTGACACCAAGAGGTTTCATGTCTGCCGATCGCATTAAAAG 395
|||||.||.||.|||||||..||.||.|||||.||.||.||.||||||||
BL01298___ydj 346 AAAGGGCTGCTCACACCAAAGGGCTTTATGTCGGCTGACCGGATTAAAAG 395
BSNT_01063___ 396 CATCACCGGCATGTATATTCCGTTTTGGATGTTTGATTTAAATAGTGAAG 445
|||.||.||||||||..|.||.||.|||||||..||||||||.||..|||
BL01298___ydj 396 CATTACAGGCATGTACGTCCCTTTCTGGATGTACGATTTAAACAGCAAAG 445
BSNT_01063___ 446 TACAGGTGAGAGCAAACTGTACCAGGGTCCACCGGTATGAAGAAGGGGAT 495
|.|||||.||.||...|||.||.|.|||.||..|||||..|.|.||.||.
BL01298___ydj 446 TGCAGGTCAGCGCCCGCTGCACAAAGGTACATAGGTATATACAGGGCGAC 495
BSNT_01063___ 496 TATATTTGCACGGAAACAGAGCACTTTGAAGCGTTTCGTGATATCAATCT 545
|||||.|.||||||.||.||.||.|.|||.||||||||.|||||||||||
BL01298___ydj 496 TATATCTACACGGAGACCGAACATTATGATGCGTTTCGCGATATCAATCT 545
BSNT_01063___ 546 CGATTATTTGAAAATCCCTGTCGATGCCTCTGAAAAAATGAAAGACGAAT 595
|||.||..|.|||.||||.||.||||||||.|||||.|||||.||..|||
BL01298___ydj 546 CGACTACATCAAAGTCCCGGTGGATGCCTCAGAAAAGATGAACGATCAAT 595
BSNT_01063___ 596 TAATGGACAAATTGGAGCCTTATTCATACGAAGAGCTGAAGGACTTTCAA 645
|.|||||||||||||||||.|||.||||.||..|||||||.||.|||.||
BL01298___ydj 596 TGATGGACAAATTGGAGCCATATCCATATGATCAGCTGAAAGATTTTAAA 645
BSNT_01063___ 646 ACGGCATATTTGGCCGGTTATATTGCGGAAAAGTACAATTATACCGATGA 695
|||||.||||||||.||.||.||.||.|||||.||.|||||....|||||
BL01298___ydj 646 ACGGCCTATTTGGCAGGCTACATCGCTGAAAAATATAATTACGATGATGA 695
BSNT_01063___ 696 GGAGCTTTTTCCGAGGGC-AAAAGAGAAAATCAGCAGTTATATAGATTCA 744
.||||||||||||.|||| ||||| .|||||||||.|.||.||.||.|||
BL01298___ydj 696 AGAGCTTTTTCCGCGGGCGAAAAG-CAAAATCAGCGGCTACATCGAGTCA 744
BSNT_01063___ 745 TACATCCATTCTACTTTTTCCGGATATACGTCAGTCAATGTG--AGGGAA 792
||.|||.||||.||..|.|||||.||.|..||||||.||||| |..|||
BL01298___ydj 745 TATATCGATTCCACCCTGTCCGGGTACAGCTCAGTCGATGTGAAAACGAA 794
BSNT_01063___ 793 AAACAT--ATTCACACGAAAAACGTGAACAGCTTTTACGTTTTGCTT--- 837
|.||.| ||.||| ||||.|||||.|||||.|| |.|||||
BL01298___ydj 795 ACACGTCGATACAC----AAAAAGTGAAAAGCTTGTA---TGTGCTTTTG 837
BSNT_01063___ 838 CCTGTTTGGATGGTCAGTTACGATTATGAAAGAGCGGAGCATATCTTTGC 887
||.||.||||||||||.||||.|.||..||..|..|||..|.||||||||
BL01298___ydj 838 CCCGTCTGGATGGTCAATTACAACTACAAACAAAAGGATTACATCTTTGC 887
BSNT_01063___ 888 GATGAACGGGCAAACAGGAAAGGTTGTTGGAAAGCCGCCGATCAG----- 932
.||||||||.|||||.|||||.||.||.||.||||||||||||||
BL01298___ydj 888 CATGAACGGACAAACGGGAAAAGTCGTCGGCAAGCCGCCGATCAGCTCAT 937
BSNT_01063___ 933 -TCGAGGAAAAGTGGCGGCATGGTTTAGCGGAATAGCAGGCGGGACATTT 981
|..||.||||.|| |||||.|||| |||.||.|.|.|
BL01298___ydj 938 TTAAAGAAAAAATG------TGGTTCAGCG--------GGCTGGCCGTCT 973
BSNT_01063___ 982 C-----TTGC---GTTGAAGCTCGTCTCATTGATG-----ATGGGAGGCG 1018
| |||| .|.||| ..||||||.|| ||||||||||
BL01298___ydj 974 CCATATTTGCACTCTGGAA-----AATCATTGCTGCTGTAATGGGAGGCG 1018
BSNT_01063___ 1019 GATTTTGA 1026
|....|||
BL01298___ydj 1019 GGGCGTGA 1026
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