Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02689 and BL01240
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:24
# Commandline: needle
# -asequence dna-align/BSNT_02689___frr.1.5803.seq
# -bsequence dna-align/BL01240___frr.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02689___frr-BL01240___frr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02689___frr-BL01240___frr.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02689___frr
# 2: BL01240___frr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 564
# Identity: 447/564 (79.3%)
# Similarity: 447/564 (79.3%)
# Gaps: 12/564 ( 2.1%)
# Score: 1733.0
#
#
#=======================================
BSNT_02689___ 1 GTGTCAAAAGAAGT-ATTAACTCAAACAAAAGAAAAAATGGAAAAAGCAA 49
|||||||...|||| ||.|| |.|||||||||||...|||.|||||||.|
BL01240___frr 1 GTGTCAACTCAAGTGATGAA-TGAAACAAAAGAACGGATGCAAAAAGCGA 49
BSNT_02689___ 50 T-TGCTGCTTATCAGCGCGAATTGGCTACTGTACGCGCAGGCCGTGCAAA 98
| .|| ||||||||||||||||||||.|||||.||||||||.||||||||
BL01240___frr 50 TAAGC-GCTTATCAGCGCGAATTGGCCACTGTCCGCGCAGGACGTGCAAA 98
BSNT_02689___ 99 TCCATCATTATTAGATAAAGTAACGGTTGAATATTACGGAGCGCAGACAC 148
|||.|||||..|.||.|||||..|.|||||.|||||||||||||||||.|
BL01240___frr 99 TCCGTCATTGCTGGACAAAGTGGCAGTTGAGTATTACGGAGCGCAGACGC 148
BSNT_02689___ 149 CTTTAAATCAG-TTGTCTTCTATTAACGTGCCTGAAGCTCGTATGCTCGT 197
|||||||.||| ||| |.||.||||..||.||.|||||.||.||||||||
BL01240___frr 149 CTTTAAACCAGATTG-CGTCCATTACAGTTCCAGAAGCGCGCATGCTCGT 197
BSNT_02689___ 198 TATCACACCATACGACAAAACAGCAATCGGCGATATCGAAAAAGCGATTT 247
.|||||||||||.||||||||.||..|||||||||||||||||||||||.
BL01240___frr 198 CATCACACCATATGACAAAACGGCGCTCGGCGATATCGAAAAAGCGATTC 247
BSNT_02689___ 248 TAAAAGCTGATTTAGGTCTTACACCAACAAGTGACGGCAATATGATTCGA 297
.||||||.||..|.|||.|.||.||..|||..|||||||||||.||.||.
BL01240___frr 248 AAAAAGCCGACCTCGGTGTAACTCCGTCAAACGACGGCAATATCATCCGG 297
BSNT_02689___ 298 ATTGCAATTCCGGCACTAACAGAAGAGAGACGGAAAGAATTAGTGAAAGT 347
||..|.||.||..|.|||||.||.|||.|..|.|||||..|.|..|||.|
BL01240___frr 298 ATCACGATCCCTCCTCTAACTGAGGAGCGCAGAAAAGAGCTTGCCAAACT 347
BSNT_02689___ 348 TGTAAAAAAATACGCTGAAGAAGCAAAAGTAGCTGTTCGTAACGTTCGCC 397
.||.||||||||..|.|||||.||.|||||.||.||.||.|||.|.||||
BL01240___frr 348 CGTGAAAAAATATTCGGAAGATGCCAAAGTCGCGGTCCGCAACATCCGCC 397
BSNT_02689___ 398 GTGATGCTAACGATGATCTCAAAAAACTTGAGAAAAACGGAGACATTACT 447
|.|||||.||.||.|||||.||||||||.||||||||.||.||.||.|||
BL01240___frr 398 GCGATGCAAATGACGATCTGAAAAAACTAGAGAAAAATGGTGAAATGACT 447
BSNT_02689___ 448 GAGGATGAACTGCGTGCTTCCACTGAAGACGTTCAAAAACTGACAGATGA 497
|||||||||.||||..||||.||.||||||||.|||||.|||||||||||
BL01240___frr 448 GAGGATGAATTGCGCTCTTCAACGGAAGACGTACAAAAGCTGACAGATGA 497
BSNT_02689___ 498 ATATGTGTCAAAAATTGACAGTG---TCACAAAAGACAAAGAAAAAGAAA 544
|||||||||||||||||| || ||||||||||.|||||.|||||||
BL01240___frr 498 ATATGTGTCAAAAATTGA---TGAGATCACAAAAGATAAAGAGAAAGAAA 544
BSNT_02689___ 545 TCATGGAAGTTTAA 558
||||||||||||||
BL01240___frr 545 TCATGGAAGTTTAA 558
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