Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02717 and BL01212
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:28
# Commandline: needle
# -asequence dna-align/BSNT_02717___spoVFB.1.5803.seq
# -bsequence dna-align/BL01212___spoVFB.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02717___spoVFB-BL01212___spoVFB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02717___spoVFB-BL01212___spoVFB.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02717___spoVFB
# 2: BL01212___spoVFB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 608
# Identity: 442/608 (72.7%)
# Similarity: 442/608 (72.7%)
# Gaps: 22/608 ( 3.6%)
# Score: 1577.5
#
#
#=======================================
BSNT_02717___ 1 ATGTCG-TCATTAAAAGGAAAAAGAATCGGGTTTGGGCTGACCGGGTCGC 49
|||||| || |||||||||||||||||.|||||.||.||.||.||.|
BL01212___spo 1 ATGTCGATC----AAAGGAAAAAGAATCGGATTTGGCCTAACGGGTTCAC 46
BSNT_02717___ 50 ATTGCACATATGAAGCGGTTTTCCCGCAAATTGAGGCGTTGGTCAATGAA 99
||||.||.|||||.||.|||||.|||||.|||||.|||.||.||||..||
BL01212___spo 47 ATTGTACGTATGATGCCGTTTTTCCGCAGATTGAAGCGCTGATCAACAAA 96
BSNT_02717___ 100 GGAGCTGAAGTCCGTCCGGTTGTCACATTTAATGTAAAATCCACAAATAC 149
||.|||||||||.|.|||||.||.||...||.|||.||.||.||..||||
BL01212___spo 97 GGGGCTGAAGTCAGACCGGTCGTGACGCATACTGTCAAGTCGACGGATAC 146
BSNT_02717___ 150 CCGATTTGGAGAGGGCGCAGAATGGGTTAAAAAAATTGAAGACCTGACTG 199
.||.||||||||.||.|.|||||||||.|.||.|||.|||||.|||||||
BL01212___spo 147 ACGCTTTGGAGAAGGGGAAGAATGGGTCAGAAGAATAGAAGAGCTGACTG 196
BSNT_02717___ 200 GATATGAGGCCATTGATTCGATTGTAAAGGCAGAACCTCTTGGACCGAAG 249
|||.|||.|.|||||||||.|||...||.||.||.|||||.||.|||||.
BL01212___spo 197 GATTTGAAGTCATTGATTCCATTCCGAAAGCTGAGCCTCTCGGGCCGAAA 246
BSNT_02717___ 250 CTGCCCCTTGACTGCATGGTCATTGCGCCTTTAACAGGCAATTCAATGAG 299
...||.||.|||||||||||..|||||||.||.||.||.|||||.|||||
BL01212___spo 247 ACACCGCTGGACTGCATGGTTGTTGCGCCATTGACGGGAAATTCGATGAG 296
BSNT_02717___ 300 CAAGCTGGCAAATGCCATGACGGACAGCCCGGTGCTGATGGCGGCAAAAG 349
||||||.|||||.|||..|||||||||.|||||.||.||||||||.||||
BL01212___spo 297 CAAGCTTGCAAACGCCCAGACGGACAGTCCGGTTCTCATGGCGGCCAAAG 346
BSNT_02717___ 350 CGACAATCCGGAACAATCGGCCTGTCGTTCTGGGTATCTCGACAAATGAT 399
||||.||..|.|||...||.||.|||||.||.||.||.||.||.|||||.
BL01212___spo 347 CGACGATGAGAAACTCCCGTCCCGTCGTCCTCGGCATTTCAACGAATGAC 396
BSNT_02717___ 400 GCTCTTGGTTTAAACGG----AACAAATTTAATGAGGCTCATGTCAACAA 445
||.||.||.||.||||| ||| ||.||||||||.|||.|..|||
BL01212___spo 397 GCGCTCGGCTTGAACGGCGTCAAC----TTGATGAGGCTGATGGCGGCAA 442
BSNT_02717___ 446 AAAATATCTTTTTTATTCCATTCGGGCAAGATGATCCATTTAAAAAACCG 495
|||||.|.|..||||||||.|||||.||.|||||.||.|..|||||.|||
BL01212___spo 443 AAAATGTTTACTTTATTCCGTTCGGCCAGGATGACCCTTACAAAAAGCCG 492
BSNT_02717___ 496 AATTCAATGGTAGCCAAAATGGATCTGCTACCGCAAACGATTGAAAAGGC 545
|||||..|.||.||||||||||||||..||..||...||.|.|||.|.||
BL01212___spo 493 AATTCGCTCGTCGCCAAAATGGATCTTTTAGTGCCGGCGGTCGAAGAAGC 542
BSNT_02717___ 546 ACTCATGCACCAGCAGCTTCAGCCGATTCTAGTTGAGAATTATCAGGGAA 595
.|||...||..|.||..|.|||||.||.||.||..|.|||.||| |
BL01212___spo 543 GCTCTCCCATAAACAAATACAGCCTATCCTGGTCCATAATGATC-----A 587
BSNT_02717___ 596 ATGACTAA 603
||.|
BL01212___spo 588 ATAA---- 591
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