Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_02993 and BL01186
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:24:41
# Commandline: needle
# -asequence dna-align/BSNT_02993___parE.1.5803.seq
# -bsequence dna-align/BL01186___parE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_02993___parE-BL01186___parE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_02993___parE-BL01186___parE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_02993___parE
# 2: BL01186___parE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1981
# Identity: 1586/1981 (80.1%)
# Similarity: 1586/1981 (80.1%)
# Gaps: 26/1981 ( 1.3%)
# Score: 6260.5
#
#
#=======================================
BSNT_02993___ 1 TTGGCTAGAAAACAGCAATTTGATTACAACGAAGATGCCATACAGGTGCT 50
||||.||.||||||||||.||||.||.||.||.|||.|||||||||||||
BL01186___par 1 TTGGTTAAAAAACAGCAAGTTGACTATAATGATGATTCCATACAGGTGCT 50
BSNT_02993___ 51 CGAAGGCCTTGAGGCTGTCAGGAAAAGGCCGGGTATGTATATTGGCTCTA 100
||||||||||||.||.|||||.|||.|.||.||||||||.||.||.||.|
BL01186___par 51 CGAAGGCCTTGAAGCGGTCAGAAAACGCCCCGGTATGTACATCGGTTCGA 100
BSNT_02993___ 101 CTGAC-GCGCGGGGTTTGCACCACTTGGTTTATGAAATTGTAGATAACTC 149
|.||| || |||||..|||||||..|.||.||||||||.||.|||||.||
BL01186___par 101 CAGACAGC-CGGGGACTGCACCATCTCGTATATGAAATCGTCGATAATTC 149
BSNT_02993___ 150 TGTCGACGAGGTGCTTGCCGGCCATGGAGATCACATAATCGTCAAAATAC 199
.|||||.||.||.|||||.||||||||.||||||||.||.||.|||||||
BL01186___par 150 CGTCGATGAAGTCCTTGCGGGCCATGGGGATCACATTATAGTAAAAATAC 199
BSNT_02993___ 200 ATAAAGACAATAGTATTTCTGTACAGGATAGAGGCCGCGGCATGCCGACC 249
|||||||.||.||.||.||.||.||.||.||||||||.||.|||||.||.
BL01186___par 200 ATAAAGATAACAGCATATCGGTGCAAGACAGAGGCCGGGGAATGCCAACA 249
BSNT_02993___ 250 GGAATGCATAAGCTCGGCAAACCAACCCCTGAAGTGATTTTAACGGTGCT 299
||||||||||||||||||||.||.||.||.|||.|.|||||.||.|||||
BL01186___par 250 GGAATGCATAAGCTCGGCAAGCCGACTCCAGAAATTATTTTGACAGTGCT 299
BSNT_02993___ 300 TCATGCCGGAGGAAAATTCGGCCAAGGCGGCTATAAGACAAGCGGCGGGC 349
.||||||||||||||.||||||||||||||||||||.||.|||||.||||
BL01186___par 300 GCATGCCGGAGGAAAGTTCGGCCAAGGCGGCTATAAAACGAGCGGGGGGC 349
BSNT_02993___ 350 TCCACGGAGTTGGTGCATCAGTCGTGAATGCTTTATCTGAATGGCTGACG 399
|.|||||.||.||||||||.||.||.||.||..|.||.||.||||||||.
BL01186___par 350 TGCACGGCGTCGGTGCATCCGTTGTAAACGCCCTGTCCGAGTGGCTGACA 399
BSNT_02993___ 400 GTTACCATTGAGCGGGACGGTTTTGTCTATCA-GCAGCGATTTGAAAATG 448
||.||.||||||||||||||...|||.|| || ||||||.||||||||.|
BL01186___par 400 GTCACGATTGAGCGGGACGGAAATGTTTA-CAGGCAGCGTTTTGAAAACG 448
BSNT_02993___ 449 GAGGAAAACCGGTTACATCTCTCGAAAAGATTGGCAAAACAAAAAAGACG 498
|.||.||||||||.|||||.||.||.||.||.||.|..||.||||||||.
BL01186___par 449 GCGGCAAACCGGTGACATCCCTTGATAAAATCGGAACGACCAAAAAGACC 498
BSNT_02993___ 499 GGAACTCTTACACACTTTAAGCCAGATCCAACGATGTTCAGCACAACCAC 548
||.||.||.|..||.||.|||||.|||||..|||||||||||||.||.||
BL01186___par 499 GGCACCCTGATTCATTTCAAGCCTGATCCTGCGATGTTCAGCACGACGAC 548
BSNT_02993___ 549 TTATAATTTTGAAACGCTCTCTGAGCGCTTAAGAGAGTCTGCGTTTTTGT 598
.|.|||.|||||||||||.||.|||||..|.|||||.||.||.|||||||
BL01186___par 549 GTTTAACTTTGAAACGCTTTCAGAGCGTCTGAGAGAATCAGCCTTTTTGT 598
BSNT_02993___ 599 TAAAAGGATTGAAAATTGAGCTGATTGATGAACGCAATGACCAGCATGAG 648
||||||||.|.|||||.||..||||.|||||||||.|| |.|.||..||
BL01186___par 599 TAAAAGGACTAAAAATAGAATTGATCGATGAACGCGAT--CAAACAAAAG 646
BSNT_02993___ 649 ----GTCTTTTATTATGAAAACGGCATAGAAGCGTTTGTTGCTTATTTAA 694
|| ||||| ||.||||||||.||.|||||.|||||.||||||||||
BL01186___par 647 AAACGT-TTTTA-TACGAAAACGGAATCGAAGCTTTTGTCGCTTATTTAA 694
BSNT_02993___ 695 ATGAAGAAAAAGACG-TCTTGTCTGAAGTGGTCTCGTTTGAGGGTGAGCA 743
||||.||.||||||| .||| ||||||||||||||.|||||.||.|||||
BL01186___par 695 ATGAGGAGAAAGACGCGCTT-TCTGAAGTGGTCTCATTTGAAGGAGAGCA 743
BSNT_02993___ 744 TCATTCTATAGAAGTGGACTTTGCGTTCCAGTTTAACGATGGTTATTCTG 793
..|....||.||.||.|||||.|||||.||||||||.||.||.|||||.|
BL01186___par 744 CAACGGCATCGAGGTTGACTTCGCGTTTCAGTTTAATGACGGCTATTCCG 793
BSNT_02993___ 794 AAAATATTTTGTCGTTTGTCAACAATGTCAGAACAAAAGACGGCGGGACA 843
||||.||..|||||||.|||||.|||||||||||.|||||.||.||.||.
BL01186___par 794 AAAACATCCTGTCGTTCGTCAATAATGTCAGAACGAAAGATGGAGGAACC 843
BSNT_02993___ 844 CATGAGTCAGGTGCAAAAACTGCGATGACGCGTGCTTTTAATGAATATGC 893
||||||||.|||||.|||||.|||||||||.|.||.||.||.||.|||||
BL01186___par 844 CATGAGTCCGGTGCCAAAACGGCGATGACGAGAGCATTCAACGAGTATGC 893
BSNT_02993___ 894 GCGAAAAGTGG--CTTTGCTGAAAGAAAAGGATAAGAACCTTGAAGGCAC 941
|.||||.|||| |||| |.|||||||||||.||.|||||||||||.||
BL01186___par 894 GAGAAAGGTGGCCCTTT--TAAAAGAAAAGGACAAAAACCTTGAAGGAAC 941
BSNT_02993___ 942 CGATATAAGGGAAGGGCTTTCAGCCATTATTTCTGTCCGCATACCTGAGG 991
.|||||.||||||||.||.||||||||..||||.|||||.||.||.||.|
BL01186___par 942 GGATATCAGGGAAGGCCTGTCAGCCATCGTTTCCGTCCGGATTCCCGAAG 991
BSNT_02993___ 992 AGCTTCTTCAATTTGAGGGACAAACAAAAGGAAAGCTCGGTACCAGTGAA 1041
||||||||||||||||.|||||.|||||||||||||||||.||.||||||
BL01186___par 992 AGCTTCTTCAATTTGAAGGACAGACAAAAGGAAAGCTCGGCACAAGTGAA 1041
BSNT_02993___ 1042 GCAAGATCAGCGGTGGATGCGATTGTTTCAGAGCAGCTTGCTTACTTTTT 1091
|||.|.|||||.||.|||||.||.||.||.||||||||.||.||.|||.|
BL01186___par 1042 GCACGGTCAGCCGTTGATGCAATCGTCTCTGAGCAGCTCGCCTATTTTCT 1091
BSNT_02993___ 1092 AGAGGAAAATCGGGACACCGCAACGCTTCTTGTCAAAAAAGCAATCAAGG 1141
.||.|||||..||||.||.|||||..|.||||||||||||||.||.||.|
BL01186___par 1092 TGAAGAAAACAGGGAAACGGCAACATTGCTTGTCAAAAAAGCGATTAAAG 1141
BSNT_02993___ 1142 CGAGCCAGGCGCGCGAAGCGGCACGCAAAGCCCGTGAAGAAGCAAGAAGC 1191
|...|||||||.|.||.||.||..|.|||||..|.|||||.|||||||||
BL01186___par 1142 CCTCCCAGGCGAGAGAGGCTGCGAGAAAAGCAAGAGAAGAGGCAAGAAGC 1191
BSNT_02993___ 1192 GGCAAAAAACGAAAAAAATCAGAAGCGACTTTAAGCGGAAAGCTGACGCC 1241
||.||.|||.||||.|||||.||||||||..|...|||.|||||||||||
BL01186___par 1192 GGAAAGAAAAGAAAGAAATCCGAAGCGACGCTCTCCGGGAAGCTGACGCC 1241
BSNT_02993___ 1242 TGCGGGTTCAAGAAACCCGGCAAAAAATGAATTGTATCTCGTTGAGGGAG 1291
|||....|||||.||.||..|.||.||.||||||||||||||.|||||.|
BL01186___par 1242 TGCACAATCAAGGAATCCATCCAAGAACGAATTGTATCTCGTGGAGGGTG 1291
BSNT_02993___ 1292 ATTCAGCAGGCGGGTCAGCCAAGCAGGGACGAGACCGCAGATTCCAGGCG 1341
||||.||.||.||.|||||.|||||||||||||||||.|.|||||||||.
BL01186___par 1292 ATTCTGCGGGAGGATCAGCAAAGCAGGGACGAGACCGGAAATTCCAGGCT 1341
BSNT_02993___ 1342 GTTCTGCCTTTACGCGGTAAAGTCATTAATACAGAAAAAGCTAAGCTTGC 1391
||.|||||..|.|||||.|||||.||.|||||.||||||||.|||||.||
BL01186___par 1342 GTCCTGCCGCTCCGCGGAAAAGTTATCAATACGGAAAAAGCGAAGCTGGC 1391
BSNT_02993___ 1392 TGATATCTTTAAAAATGAAGAGATCAATACGATCATTCATGCGATCGGCG 1441
.|||||.||||||||||||||||||||||||||||||||.||||||||||
BL01186___par 1392 CGATATTTTTAAAAATGAAGAGATCAATACGATCATTCACGCGATCGGCG 1441
BSNT_02993___ 1442 GGGGAGTCGGGGCAGATTTCTCA-ATCGATGACATCAACTACGACAAAAT 1490
|.||.|||||.||.||||| |.| ||.||.||||||||.|||||||||.|
BL01186___par 1442 GAGGGGTCGGCGCCGATTT-TGACATTGAGGACATCAATTACGACAAAGT 1490
BSNT_02993___ 1491 CATCATTATGACCGATGCCGATACTGACGGCGCCCATATTCAAGTGCTGC 1540
|||.||.|||||.|||||.|||||.||||||||.|||||.||||||||||
BL01186___par 1491 CATTATCATGACAGATGCGGATACAGACGGCGCGCATATCCAAGTGCTGC 1540
BSNT_02993___ 1541 TTCTTACCTTTTTCTATCGCTATATGAAACCGCTCATTGAGCATGGCAAG 1590
|.||.||.||||||||.|||||||||||.|||||.||.|||||.||.||.
BL01186___par 1541 TCCTGACTTTTTTCTACCGCTATATGAAGCCGCTGATCGAGCACGGAAAA 1590
BSNT_02993___ 1591 GTGTTCATTGCGCTGCCACCTTTATATAAGGTCAGTAAAGGAAG-CGGG- 1638
|||||.||.||.|||||.||..|.|||||.||.||.||||| | ||||
BL01186___par 1591 GTGTTTATCGCACTGCCGCCGCTCTATAAAGTGAGCAAAGG--GTCGGGC 1638
BSNT_02993___ 1639 AAGAAGGAAATCATTGAATATGCATGGTCTGATGAAGAGATGGGTGATGT 1688
||.||.|||||||||||||||||.|||||||||||.||.||||..||.||
BL01186___par 1639 AAAAAAGAAATCATTGAATATGCCTGGTCTGATGAGGAAATGGACGACGT 1688
BSNT_02993___ 1689 CCTGAAAAAAGTCGGCAAAGGCTATACCATTCAACGATATAAGGGTCTTG 1738
|||.|||||||||||.|||||.|||||.||.||.||.|||||.|||||.|
BL01186___par 1689 CCTCAAAAAAGTCGGAAAAGGATATACGATCCAGCGCTATAAAGGTCTCG 1738
BSNT_02993___ 1739 GAGAGATGAACGCAGACCAGTTGTGGGAAACGACGATGAATCCGGAGTCC 1788
|.||.||||||||.||||||.|.|||||||||||.|||||.||.|||||.
BL01186___par 1739 GCGAAATGAACGCTGACCAGCTTTGGGAAACGACAATGAACCCCGAGTCA 1788
BSNT_02993___ 1789 CGCACACTTGTTAGGGTCAAAATTGACGATGCGGCACGTGTAGAAAGACG 1838
.|.||||||||.|||||.|||||.||.||.|||||.||.||.|||.|.||
BL01186___par 1789 AGAACACTTGTCAGGGTTAAAATCGATGACGCGGCCCGGGTGGAACGGCG 1838
BSNT_02993___ 1839 TGTGACGACGTTAATGGGAGACAAAGTAGAGCCGCGCAGAAAGTGGATTG 1888
.||.|||||.||.|||||.||||||||.||||||.|.|||||.|||||||
BL01186___par 1839 CGTAACGACATTGATGGGCGACAAAGTTGAGCCGAGGAGAAAATGGATTG 1888
BSNT_02993___ 1889 AGAAAAACGTCGCTTTTGG-CTTAGATGAAGAAAGCAATATCTTAGAAAA 1937
||||||||||||||||.|| ||| ||||||||||||||.||.||.|||||
BL01186___par 1889 AGAAAAACGTCGCTTTCGGACTT-GATGAAGAAAGCAACATTTTGGAAAA 1937
BSNT_02993___ 1938 TGAAAACTTATCGGTCGCTGAGGAGGTTTAA 1968
.||.||.||||||||||||||||||||||||
BL01186___par 1938 CGAGAATTTATCGGTCGCTGAGGAGGTTTAA 1968
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