Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05696 and BL01173
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:48
# Commandline: needle
# -asequence dna-align/BSNT_05696___narH.1.5803.seq
# -bsequence dna-align/BL01173___narH.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05696___narH-BL01173___narH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05696___narH-BL01173___narH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05696___narH
# 2: BL01173___narH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1499
# Identity: 1183/1499 (78.9%)
# Similarity: 1183/1499 (78.9%)
# Gaps: 64/1499 ( 4.3%)
# Score: 4670.5
#
#
#=======================================
BSNT_05696___ 1 TTGAAGATTAAAGCGCAAATCGGTATGGTCATGAACTTGGATAAATGCAT 50
|||||||||||||||||||||||.|||||.||||||.|.||.||||||||
BL01173___nar 1 TTGAAGATTAAAGCGCAAATCGGAATGGTAATGAACCTTGACAAATGCAT 50
BSNT_05696___ 51 CGGCTGCCACACGTGCAGCGTCACCTGCAAAAACACGTGGACAAACCGTT 100
|||||||||.||.|||||||||||.|||||||||||.|||||||||||||
BL01173___nar 51 CGGCTGCCATACATGCAGCGTCACATGCAAAAACACTTGGACAAACCGTT 100
BSNT_05696___ 101 CCGGTGCGGAATATATGTACTTCAATAATGTAGAAACAAAGCCGGGCATC 150
|||||||.|||||||||||||||||.||.||.||||||||.|||||||||
BL01173___nar 101 CCGGTGCAGAATATATGTACTTCAACAACGTCGAAACAAAACCGGGCATC 150
BSNT_05696___ 151 GGCTACCCGAAGCAATGGGAGGACCAGGACAAATATAAAGGCGGCTGGAC 200
||||||||.||.|||||||||.|||||||.|||||.||||||||||||..
BL01173___nar 151 GGCTACCCTAAACAATGGGAGAACCAGGATAAATACAAAGGCGGCTGGGA 200
BSNT_05696___ 201 ATTGAAAAAAGGAAAGCTCGAGCTGAAATCGGGCTCGAAAACCAATCGGC 250
..||||||||||.||||||.||||.|||||.|||.|.|||.|.|..||||
BL01173___nar 201 GCTGAAAAAAGGCAAGCTCCAGCTTAAATCAGGCGCCAAAGCAACGCGGC 250
BSNT_05696___ 251 TTGCAGGCCTT--TTCTATAATCCGAATCAGCCGTCGATTGATGATTACT 298
| ||.|..|| |||||.||.|||.||||||||.||||.|||||.||||
BL01173___nar 251 T--CATGAATTTATTCTACAACCCGTATCAGCCGACGATCGATGACTACT 298
BSNT_05696___ 299 ATGAACCCTGGAACTATGATTATGAAACATTAACGAACAGCCCGCAGAAA 348
|||||||.||||||||||||||||||||..|.||.|||||.|||.|||||
BL01173___nar 299 ATGAACCTTGGAACTATGATTATGAAACGCTGACAAACAGTCCGGAGAAA 348
BSNT_05696___ 349 AAACACCAGCCGGTTGCACGCCCGAAATCGTCCTTGACGGGGGATTTCAT 398
|||||.|||||.||||||.|.|||||.||.|||.|.|||||.||.|||||
BL01173___nar 349 AAACATCAGCCTGTTGCAAGGCCGAAGTCTTCCATTACGGGAGACTTCAT 398
BSNT_05696___ 399 GAATATCGAATGGGGACCGAACTGGGAGGATGATCTCGCGGGCGGCCACA 448
|||..|.||||||||.|||||||||||.||.|||||.||.||||||||||
BL01173___nar 399 GAACCTTGAATGGGGTCCGAACTGGGAAGACGATCTTGCCGGCGGCCACA 448
BSNT_05696___ 449 TAACGGGACTTGAAGATCCCAACGTACAAAAGATGGAGGAATCGATCAAA 498
|.||.||.||..|||||||.|||||..||||.|||||.|||||.||||||
BL01173___nar 449 TTACAGGCCTCCAAGATCCAAACGTCAAAAAAATGGAAGAATCCATCAAA 498
BSNT_05696___ 499 ACAGAATTCGATGAGGTTTTTATGATGTATTTGCCCCGTATTTGCGAGCA 548
||.|||||.||.||.||.||||||||||||.||||..|.||.|||||.||
BL01173___nar 499 ACCGAATTTGAAGACGTCTTTATGATGTATCTGCCAAGGATATGCGAACA 548
BSNT_05696___ 549 CTGCATCAACCCGGCGTGCGTCTCATCCTGTCCATCCGGCGCCATGTACA 598
|||||||||.||..|.||||||||.||||||||.||.||.||.|||||||
BL01173___nar 549 CTGCATCAATCCTTCCTGCGTCTCCTCCTGTCCGTCGGGAGCGATGTACA 598
BSNT_05696___ 599 AACGCGAGGAGGACGGCATTGTGCTTGTGGATCAAAACGCATGCCGTTCA 648
||||||||||.||||||||.||.||.||.||||||||.||.|||||.|||
BL01173___nar 599 AACGCGAGGAAGACGGCATCGTTCTCGTCGATCAAAATGCGTGCCGCTCA 648
BSNT_05696___ 649 TGGAGATATTGCGTCTCATCCTGTCCTTATAAAAAAGTCTATTTTAACTG 698
||||||.|.||.||.|||||.|||||||||||||||||.|||||.|||||
BL01173___nar 649 TGGAGACACTGTGTATCATCATGTCCTTATAAAAAAGTGTATTTCAACTG 698
BSNT_05696___ 699 GCAAACGAACAAAGCGGAAAAATGCACACTCTGCTTTCCGCGTTTGGAGG 748
|||.||.|||||.|||||||||||||||.|.|||||.||.|||.|.||.|
BL01173___nar 699 GCAGACTAACAAGGCGGAAAAATGCACATTGTGCTTCCCTCGTCTTGAAG 748
BSNT_05696___ 749 CGGGACTGCCAACCATCTGCTCTGAGACGTGTGTTGGCAGAATCCGCTAC 798
|.||||||||.||.||||||||||||||.||.||.||||||||||||||.
BL01173___nar 749 CAGGACTGCCGACAATCTGCTCTGAGACATGCGTCGGCAGAATCCGCTAT 798
BSNT_05696___ 799 CTCGGCGTCATGCTGTATGACGCGGACAAAGTGGAGGAAGCGGCATCTGT 848
|||||.||||||||.||||||||.||.|||||.||.||||||||.||.|.
BL01173___nar 799 CTCGGAGTCATGCTTTATGACGCAGAAAAAGTCGAAGAAGCGGCTTCAGC 848
BSNT_05696___ 849 TGAAAATGAAAAGGATCTCTACCATTCCCAATTGGACGTTTTTCTTGATC 898
.|||||||||||.|||.|.||.||.||.||..||||..||||.|||||.|
BL01173___nar 849 CGAAAATGAAAAAGATTTGTATCACTCACAGCTGGAGATTTTCCTTGACC 898
BSNT_05696___ 899 CGAATGATCCTGAGGTTGCCAAGCTG--GCAAAAGAACAAGGCATTCCGG 946
||||||||||.|..||||| ||..| |||||||..||||||||||| |
BL01173___nar 899 CGAATGATCCCGCTGTTGC--AGAAGAAGCAAAAGCTCAAGGCATTCC-G 945
BSNT_05696___ 947 CT-GAATGGATAGAGGCTGCGCAGCAATCGCCGATTTATAAAATGATCAT 995
|| ||.|||||.||.||.|||||..||||.|||||.||.|||||||||||
BL01173___nar 946 CTGGAGTGGATTGAAGCAGCGCAAAAATCTCCGATCTACAAAATGATCAT 995
BSNT_05696___ 996 TGACTGGAAGATTGCGCTGCCGCTTCATCCAGAGTACCGCACCCTGCCAA 1045
.||.|||||.||.||.||||||||.|||||.||.|||||.||..||||.|
BL01173___nar 996 CGATTGGAAAATCGCTCTGCCGCTGCATCCTGAATACCGGACATTGCCGA 1045
BSNT_05696___ 1046 TGGTGTGGTACATTCCGCCGCTCAGCCCGATTATGAATCTCTTTGAAGGA 1095
||||.|||||.|||||.||||||||.||||||||||||.|.|||||||||
BL01173___nar 1046 TGGTATGGTATATTCCTCCGCTCAGTCCGATTATGAATATGTTTGAAGGA 1095
BSNT_05696___ 1096 AAAGG--CAGCCGGCAATCCGCGGAAGATATTTTTCCGGCTATCGACCAA 1143
||||| ||||| |||||.||.||||||||.||.||.|||||.||..||
BL01173___nar 1096 AAAGGAACAGCC--CAATCAGCTGAAGATATCTTCCCTGCTATTGATGAA 1143
BSNT_05696___ 1144 ATGAGAATCCCGATAGATTATTTGGCGCA----GCTGTTAACAGCCGGTG 1189
|||.|.||.|||||.||.|||||||| || |||| ||.|||||||
BL01173___nar 1144 ATGCGGATTCCGATCGAATATTTGGC-CAATTTGCTG---ACTGCCGGTG 1189
BSNT_05696___ 1190 ATACGGATCATATTCGGTCAACGTTGAAGAAAATGTCTGTCATGCGCCAG 1239
||||..|.||||||.|..|.||.||.||||||||||||||.|||| |
BL01173___nar 1190 ATACACACCATATTAGAACGACATTAAAGAAAATGTCTGTGATGC----G 1235
BSNT_05696___ 1240 TAT----ATGAGAGCGATCCAGACGAATAAATCA-ATCGACCCGGAACTG 1284
||| |||.|.||||.|||.|||||.||| || |||||..|....|||
BL01173___nar 1236 TATGCACATGCGGGCGACCCAAACGAACAAA-CAGATCGATTCATCTCTG 1284
BSNT_05696___ 1285 ATCTCCAG-TGTCGGCTTAACAGAACAGCAAATTGAAGATATGTATCGGC 1333
|| ||.|| |..|||.||.||.|||.||||.||||||||.|||||.||.|
BL01173___nar 1285 AT-TCAAGATACCGGATTGACTGAAGAGCAGATTGAAGACATGTACCGTC 1333
BSNT_05696___ 1334 TGCTTGCGATTGCCAAATATGATGACCGCTTTGTGAT-------ACCGAG 1376
|||||||.||.||||||||.||||||||.||.||.|| |||
BL01173___nar 1334 TGCTTGCAATCGCCAAATACGATGACCGGTTCGTCATTCCTCAAACC--- 1380
BSNT_05696___ 1377 CAGTCATCGAGAAGAAGTTTCAGATTTAT--ATGCTGAACAAGGGAGCTG 1424
|||||.||||||||..|.|||.||| ||| ||||||||.|||||
BL01173___nar 1381 ----CATCGCGAAGAAGTCGCGGATCTATACATG--GAACAAGGAAGCTG 1424
BSNT_05696___ 1425 CGGCTTATCATTTTCAGGCGGCCCCGGCTCCTGTTTCTAA--------- 1464
|||.|||||.|||.|.||.||.|||||||| ||.|.||
BL01173___nar 1425 CGGATTATCGTTTGCCGGAGGACCCGGCTC---TTGCCAAAACATATAA 1470
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