Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04045 and BL01153
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence dna-align/BSNT_04045___nadA.1.5803.seq
# -bsequence dna-align/BL01153___nadA.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04045___nadA-BL01153___nadA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04045___nadA-BL01153___nadA.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04045___nadA
# 2: BL01153___nadA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1171
# Identity: 806/1171 (68.8%)
# Similarity: 806/1171 (68.8%)
# Gaps: 125/1171 (10.7%)
# Score: 2675.5
#
#
#=======================================
BSNT_04045___ 1 ATGTCAATTCTTGATGTGATCAAACAATCGAATGA------------TAT 38
|||||.|||.|..|.||||| || |||| .||
BL01153___nad 1 ATGTCTATTTTAAAAGTGAT-------TC--ATGACAGGAACGCCGGCAT 41
BSNT_04045___ 39 GATGCCCGAAAGT-TATAAAGAACT-------------ATCG-AGAAAGG 73
|||| |||.|.|| |||||||||.| ||.| .|.||||
BL01153___nad 42 GATG-CCGGAGGTGTATAAAGAATTGACTGAGGAAGAAATGGCCGGAAGG 90
BSNT_04045___ 74 ATATGGAAACGCGCGTTGCCGCCATTAAAAAAAAGTTCGGCAGC-AGGCT 122
||.|.|||| ||.|||||.||.||||| ||| |||||
BL01153___nad 91 ATTTTGAAA--------------ATCAAAAAGAAATTCGG-AGCAAGGCT 125
BSNT_04045___ 123 CTTTATACCAGGCCATCATTATCAAAAGGATGAAGTGATACAATTTGCTG 172
.|||||.||.||.|||||.||.|||||.||.||||||||.||||||||.|
BL01153___nad 126 GTTTATCCCGGGGCATCACTACCAAAAAGACGAAGTGATTCAATTTGCGG 175
BSNT_04045___ 173 ACCAAACAGGCGACTCCCTGCAATTGGCCCAAGTAGCGGAAAAAAACAAA 222
||...||.|||||.||.||.||..||||.||.||.||..|||||||.|||
BL01153___nad 176 ACGCGACGGGCGATTCGCTCCAGCTGGCACAGGTCGCCCAAAAAAATAAA 225
BSNT_04045___ 223 GAAGCGGATTATATCGTATTTTGCGGCGTTCACTTTATGGCAGAAACCGC 272
.|||||||.||||||||.||.||||||||.||.||||||||.|||||.||
BL01153___nad 226 AAAGCGGAATATATCGTGTTCTGCGGCGTACATTTTATGGCGGAAACAGC 275
BSNT_04045___ 273 CGATATGCTGACAAGCGAGCGG-----CAAACGGTCGTCCTGCCAGATAT 317
|||||||||.|| ..||| ||.|..|||||..||||.||.||
BL01153___nad 276 CGATATGCTCAC-----TTCGGACGAACAGATTGTCGTTTTGCCGGACAT 320
BSNT_04045___ 318 GAGAGCAGGATGTTCTATGGCTGACATGGCTGACATGCAGCAGACCAATA 367
|.|.|||||.|||||.|||||.||.|||||..|.||||.||||||.|||.
BL01153___nad 321 GCGCGCAGGCTGTTCGATGGCCGATATGGCCAATATGCGGCAGACAAATC 370
BSNT_04045___ 368 GGGCAT-GGAAGAAGCTTCAGCATATATTTGGAGATACGATCATACCTTT 416
|.||.| ||||| ||||...|.|..|.|||||.||||||.||||.||..|
BL01153___nad 371 GCGCCTGGGAAG-AGCTGACGAAGCTGTTTGGCGATACGGTCATTCCGCT 419
BSNT_04045___ 417 AACTTATGTGAACTCCACTGCGGAGATCAAGGCATTCGTCGGAAAACATG 466
.||.|||||.||.||.||.||.||.||.|||||.||.||.||||.|.|.|
BL01153___nad 420 CACATATGTCAATTCGACAGCTGAAATTAAGGCTTTTGTGGGAAGAAACG 469
BSNT_04045___ 467 GCGGAGCAACTGTGACTTCTTCAAATGCGAAAAAAGTGC-----TTGA-A 510
|.|||||..|.|||||.||.||||||||| |.|| |||| |
BL01153___nad 470 GAGGAGCGTCCGTGACATCCTCAAATGCG------GCGCGCATGTTGACA 513
BSNT_04045___ 511 TGGGCGTTTACACAGAAAAAAAGAATTTTATTTTTGCCTGATCAGCATTT 560
||||||.|..|.||.||..|.||.|||||||||.|.||.||||||||.||
BL01153___nad 514 TGGGCGCTATCGCAAAAGGAGAGGATTTTATTTCTTCCGGATCAGCACTT 563
BSNT_04045___ 561 AGGGA-GAAATACGGCTTATGATCTGGGCATTGCGCTCGAAG--ATATGG 607
|||| |.||.|||||.|.|||.||.|||||| .|||.||| ..||||
BL01153___nad 564 -GGGACGCAACACGGCATTTGACCTCGGCATT--CCTCTAAGCAGGATGG 610
BSNT_04045___ 608 CTGTGTGGGACCCGAT------AAAAGATGAATTAGTAGCTGAATCCGGG 651
|.||.|||||.||.|| ||||..|| |||| .|| |||.
BL01153___nad 611 CGGTATGGGATCCAATTGCAGAAAAACTTG----AGTA---TAA--CGGC 651
BSNT_04045___ 652 CATACGAATG---TGAAAGTGATTTTGTGGAAAGGGCATTGCTCTGTTCA 698
.|||.|||.| |.|.|.|.|||||||||||.||||||||.||.|||||
BL01153___nad 652 GATATGAAAGACATAATAATCATTTTGTGGAAGGGGCATTGTTCAGTTCA 701
BSNT_04045___ 699 CGAGAAATTCACC------ACTA--AAAATATCCTTGATATGAGAGAGCG 740
|||.|||||.||| |.|| |||| .|.|.|.||||||
BL01153___nad 702 CGAAAAATTTACCGTGGCGAATATCAAAA--------GTGTTAAAGAGCG 743
BSNT_04045___ 741 AGACCCCGACATTCAGATCATTGTGCACCCGGAATGTTCACACGAAGTCG 790
.||.||.|||||..|..|.||.||.||.||||||||..|.||||||||||
BL01153___nad 744 GGATCCGGACATCAATGTTATCGTTCATCCGGAATGCACCCACGAAGTCG 793
BSNT_04045___ 791 TGACACTAAGCGATGATAACGGATCAACGAAATATATTATCGACACAATC 840
|..|.||.||||||...|.||||||.||.|||.|.||.||||||.|.||.
BL01153___nad 794 TTGCGCTCAGCGATTTCAGCGGATCTACAAAAAAAATCATCGACTCCATT 843
BSNT_04045___ 841 AACCAGGCTCCGGCGGGAAGCAAGTGGGCAATCGGGACAGAAATGAATCT 890
||..|.||.....||||.|||||.|||||.||.||.|||||.|||||.||
BL01153___nad 844 AATGAAGCAAAACCGGGGAGCAAATGGGCGATTGGAACAGAGATGAACCT 893
BSNT_04045___ 891 TG-TTCAGCGGATCATTCACGAGCATCCAGATAAACAAATCGAATCACTC 939
|| |||| ||.||||||||.||.|||||.|||||||||||||||||.||.
BL01153___nad 894 TGTTTCA-CGCATCATTCAAGAACATCCTGATAAACAAATCGAATCCCTT 942
BSNT_04045___ 940 AACCCTGACATGTGCCCTTGCCTGACAATGAACCGAATTGATTTGCCGCA 989
||||||||.|||||.|||||..|||||||||||.||||.||..|||||||
BL01153___nad 943 AACCCTGATATGTGTCCTTGTTTGACAATGAACAGAATCGACATGCCGCA 992
BSNT_04045___ 990 TTTGTTGTGGTCGCTGGAACAAATTGAAAAAGGAGAACCTTCAGGCGTCA 1039
||||.|||||||||||||.||.||.||.|||||.|||||..|||||||.|
BL01153___nad 993 TTTGCTGTGGTCGCTGGAGCAGATCGACAAAGGTGAACCGACAGGCGTGA 1042
BSNT_04045___ 1040 TCAAGGTGCCAAAAGCCATT-CAGGAAGATGCACTCCTTGCCCTGAATCG 1088
||||.|||....|||..||| || .|||||||..|.|||||.||||||||
BL01153___nad 1043 TCAAAGTGGATCAAGATATTGCA-AAAGATGCCATTCTTGCGCTGAATCG 1091
BSNT_04045___ 1089 AATGCTTTCGATCACGT--AG 1107
.|||.|..||||| ||| |
BL01153___nad 1092 GATGTTAACGATC-CGTTAA- 1110
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