Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04032 and BL01135
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:05
# Commandline: needle
# -asequence dna-align/BSNT_04032.1.5803.seq
# -bsequence dna-align/BL01135___yrzF.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04032-BL01135___yrzF.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04032-BL01135___yrzF.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04032
# 2: BL01135___yrzF
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 722
# Identity: 442/722 (61.2%)
# Similarity: 442/722 (61.2%)
# Gaps: 145/722 (20.1%)
# Score: 1247.5
#
#
#=======================================
BSNT_04032 1 ATGCTGACAAAAGCAGAGGCACTGGCCCATTCCGTCATATACCGCAAGAA 50
.|||.||| |||.|||.|| |||.| ||||
BL01135___yrz 1 ---GTGAAAAA------------GGCGCATACC----TATGC----AGAA 27
BSNT_04032 51 -CAGCAGA-TTTGAT--------AAAG-TCAAAGAG---------AAATC 80
|.|.|.| |.|||| |||| ||||..|| |||.|
BL01135___yrz 28 GCCGTAAAGTATGATACGAAAAAAAAGTTCAACAAGCTTATCCAAAAACC 77
BSNT_04032 81 CGAGGAATTAACACTAATCGGCAAGGGAAGAAGCGCCTATGTGTT----- 125
|||.||.||...|.|.|||||.||.||.||.|||||.||.||.||
BL01135___yrz 78 CGATGACTTGGAATTGATCGGGAAAGGCAGGAGCGCATACGTTTTTAAGC 127
BSNT_04032 126 TGCCTTAACAGAAGGCGGTCGAAAAATGGCGCTGAAAGTATTTTTTCCGG 175
||.||.| |||.|||||..|..|||||||.||.|||||.||||||||.|
BL01135___yrz 128 TGACTGA--AGAGGGCGGCAGGGAAATGGCTCTTAAAGTCTTTTTTCCTG 175
BSNT_04032 176 AAT--------ATCGAGCGACAGCAGTCAAAGAAGCAGCGATCTATGAAA 217
||| |||| |.||| |..|||||.|.|||.||..|||
BL01135___yrz 176 AATTTAAGAACATCG-----CCGCA---AGGGAAGCGGAGATTTACAAAA 217
BSNT_04032 218 AATTAGC---CGGGTCCGCATT-CTATCCTGACATTTACGAAAC-TGGCG 262
||| |.|.|.||.||| .||||||||.||.||.||||| .|||.
BL01135___yrz 218 ----AGCTTTCTGATTCGAATTATTATCCTGATATATATGAAACAGGGCC 263
BSNT_04032 263 ATTCATTTATTCTCATGGAATATATTAAAGGTGAAACCTTTTATAACTGT 312
| ||||.||||.|.|||||.|||||||||||..|.||.||||||.|.|||
BL01135___yrz 264 A-TCATATATTTTAATGGAGTATATTAAAGGATATACTTTTTATGAGTGT 312
BSNT_04032 313 CTGAAGAAAGGCATTGCAATCAGTGATGACATGATTCAGC-AGG------ 355
.|.||.|||||||||...|||..||||||||||| ||.|| |||
BL01135___yrz 313 TTAAACAAAGGCATTCGGATCGATGATGACATGA-TCTGCGAGGTCGACC 361
BSNT_04032 356 -----TTGAA-GAAGCGCTTTCTGACGCCCGGGCAGCCGGACTGAACCCG 399
||||| ||.|| ||.|| ||.| .|||.||||.||.
BL01135___yrz 362 GCGCATTGAACGATGC-------GAGGC---GGAA--AGGATTGAATCCA 399
BSNT_04032 400 TCAGATATTCATTTGCGAAATCTGATATTGACAGAAACCGGGGCGGTGCG 449
||.|||||.||..|.|||||.||||||.|||| ||.||..|
BL01135___yrz 400 TCCGATATCCACCTCCGAAACCTGATACTGAC----------GCCGTCTG 439
BSNT_04032 450 G----------GTGATTGATGTTGCGAGATTTGAGCAAACAAAAACATGC 489
| ||.||.|||||.||.||||||..|||.||.|||..||||
BL01135___yrz 440 GAACAATCAAAGTCATCGATGTCGCCAGATTTTTGCAGACGAAAGAATGC 489
BSNT_04032 490 ACGCAGTGGGACGACTTAAAATCCGCATATCATGCACTCTACAAAAAA-- 537
|.|||||||||.|||||||||.|.||.|||||..|.||.|||||||||
BL01135___yrz 490 AGGCAGTGGGATGACTTAAAAACAGCCTATCAAACCCTTTACAAAAAAAG 539
BSNT_04032 538 CCGATATTCCCCAAAAAGATTCCGGGTT----TTTGGCTGGAGATCATCG 583
||| .|||||..|.|.|.|||| | |.|||.||||..|.||||
BL01135___yrz 540 CCG--TTTCCCGCAGAGGCTTCC----TAAGATGTGGATGGAATTGATCG 583
BSNT_04032 584 C--ATTTTTATATAAGAAAGATTGGTTTCAAAAGCATTTCGCACAGCGGA 631
| ||.|||||| ||.|||| .|||.|||||||.||.|..|| |..|.||
BL01135___yrz 584 CTTATCTTTATA-AAAAAAG-CTGGCTTCAAAAACAATGGGC-CTCCAGA 630
BSNT_04032 632 AAAGAAAATATT-----CTTAA 648
||| ||.|.||| |.|||
BL01135___yrz 631 AAA-AACAAATTTCACCCGTAA 651
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