Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01723 and BL01106
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:12
# Commandline: needle
# -asequence dna-align/BSNT_01723___yhgC.1.5803.seq
# -bsequence dna-align/BL01106___yhgC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01723___yhgC-BL01106___yhgC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01723___yhgC-BL01106___yhgC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01723___yhgC
# 2: BL01106___yhgC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 516
# Identity: 354/516 (68.6%)
# Similarity: 354/516 (68.6%)
# Gaps: 27/516 ( 5.2%)
# Score: 1055.0
#
#
#=======================================
BSNT_01723___ 1 ATGAAGGTTTATATTACATATGGGACAGCCGATTTTTTAAAAACGATCGT 50
.||||..||||.||||||||.||.||.|.||||||||||||||.|.|||
BL01106___yhg 1 TTGAATTTTTACATTACATACGGAACTGTCGATTTTTTAAAAAAGCTCG- 49
BSNT_01723___ 51 ACAGA-AGCATCCCTC-AGAAAATATCCTTTTGATGCAGGGGCAGGAAAA 98
.||.| |||| |..|| .|||||.||..|.||.|||.|..|.||.||...
BL01106___yhg 50 CCAAACAGCA-CGGTCTTGAAAACATGTTATTTATGAAAAGCCACGATTC 98
BSNT_01723___ 99 CGCCATTTTAATTCATGAAACAAACGGAGATACCGTTTTCCAGGCACCAC 148
|||||||.|..||||.|||||..|||||||.|.|||.||.||..|.||.|
BL01106___yhg 99 CGCCATTCTCTTTCACGAAACCGACGGAGAAAGCGTCTTTCATTCTCCTC 148
BSNT_01723___ 149 A-CGCTTATGAAGTCATTGACCAAGTCGGAGAGATC----AAACATCCCG 193
| ||| ||.|||.||||.||.| |||||| |||| .|||||.|||
BL01106___yhg 149 ACCGC-TACGAAATCATCGATC-AGTCGG---GATCTTTGGAACATTCCG 193
BSNT_01723___ 194 GTTTTGCAGTATTGAACAATATTGCCGTTACTCAGGAAGGGCGTCCGCTG 243
|.||..|.||..|.|||||.||..|.||.||.|.||||||..|.|||||.
BL01106___yhg 194 GATTCACCGTCCTCAACAACATCCCTGTCACACCGGAAGGAAGGCCGCTT 243
BSNT_01723___ 244 TTTGAAAACAGATTTAAAAACAGAGCGGGAAAAGTCGAAAACGAGCCTGG 293
||.|||..|.|.||||||||||||||.||||||.|||||||..||||.||
BL01106___yhg 244 TTCGAAGCCCGTTTTAAAAACAGAGCCGGAAAAATCGAAAATCAGCCCGG 293
BSNT_01723___ 294 CTTTGAAGCAATTCGAGTGCTCCGTCCGCTTGACAGTGACACCTATGTCA 343
||||.||||..|..|.|||||..|.|||...|||||.||.||.|||.||.
BL01106___yhg 294 CTTTAAAGCCCTCAGGGTGCTGAGGCCGAAAGACAGCGATACGTATATCG 343
BSNT_01723___ 344 TTCTGACCTTGTGGGAAACGGAA-AGCGCCTTTCAAGACTGGCAGCAGTC 392
|..||||..|||||||.|..||| || .|.||||||||||||.|..|.||
BL01106___yhg 344 TATTGACACTGTGGGACAGAGAACAG-TCATTTCAAGACTGGAAAAACTC 392
BSNT_01723___ 393 CGGTTCTTACAAAGAAGCCCA-CAAAAAACGCGATACATCTGCCGGAATT 441
|...||.|.||..|||||||| |||||.|.| ||..|.||.||.|||||.
BL01106___yhg 393 CAAGTCGTTCAGCGAAGCCCACCAAAAGAAG-GAATCTTCCGCAGGAATC 441
BSNT_01723___ 442 GACACAACG----TCGATCTTCTCCCGGCCTTCCTATGTCACCACATAT- 486
.|| |||.| .||||.||.|||||.||.||||||.|..|..|.|||
BL01106___yhg 442 AAC-CAAGGCGGAACGATTTTTTCCCGCCCATCCTATATTTCTTCGTATC 490
BSNT_01723___ 487 -TTCGCTGTCGAATAG 501
|| ||||||||||.
BL01106___yhg 491 ATT--CTGTCGAATAA 504
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