Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_01736 and BL01077
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:23:14
# Commandline: needle
# -asequence dna-align/BSNT_01736___yhfE.1.5803.seq
# -bsequence dna-align/BL01077___yhfE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_01736___yhfE-BL01077___yhfE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_01736___yhfE-BL01077___yhfE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_01736___yhfE
# 2: BL01077___yhfE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1081
# Identity: 799/1081 (73.9%)
# Similarity: 799/1081 (73.9%)
# Gaps: 83/1081 ( 7.7%)
# Score: 2912.0
#
#
#=======================================
BSNT_01736___ 1 ATGACGTCTGTACGTAAAACGATGGAGCTCATTAAAGAACTGGTATCGAT 50
|.|||.|.||..|||||||||||||||||.||.||.||.||.||.||
BL01077___yhf 1 ---ATGTCAGGACAGAAAACGATGGAGCTCATCAAGGAGCTCGTCTCCAT 47
BSNT_01736___ 51 CCCAAGCCCGACCGGAAATACATATGAGGTGATCAATTATATTGAAAGCC 100
|||.|||||.|||||||||||.|||||..|.||..|.|||||..|..|||
BL01077___yhf 48 CCCGAGCCCTACCGGAAATACGTATGACATTATAGACTATATCAACCGCC 97
BSNT_01736___ 101 TTTTA---AAAGAATGGAAGGTAGAAAC--GGTTCGGAACCACAAGGGCG 145
||||| |||||| ||| ||.||||| || |..||||..||.||||
BL01077___yhf 98 TTTTAGAGAAAGAA-GGA--GTTGAAACAAGG--CATAACCGTAAAGGCG 142
BSNT_01736___ 146 GCTTAATTGCAACGCTTCCAGGACGC-GACACATCCCGGCATCGCATGCT 194
||.|.||.||.|||.|.|| ||.|.| ||||.|||||||||..|.|||||
BL01077___yhf 143 GCCTGATCGCGACGATACC-GGGCTCTGACAAATCCCGGCACAGGATGCT 191
BSNT_01736___ 195 GACTGCGCACGTTGACACCCTCGGCGCTATGGTAAAGGAAATTAAAGCGG 244
|||.||.||.||.||.||||||||.||||||||.||.||.||||||.||.
BL01077___yhf 192 GACCGCTCATGTCGATACCCTCGGAGCTATGGTGAAAGAGATTAAACCGA 241
BSNT_01736___ 245 ACGGCCGGCTGAAAATCGATTTAATCGGCGGGTTCCGCTACAACTCGATT 294
||||..||||||||||.|||||||||||.||.|||...||||||||||||
BL01077___yhf 242 ACGGAAGGCTGAAAATTGATTTAATCGGGGGCTTCAATTACAACTCGATT 291
BSNT_01736___ 295 GAGGGGGAGTATTGCCAAATTGAAACCGCCTCAGGAAAAACGTACACAGG 344
||.||.|||||||||.|.||||||||.||.||.||.|||||.|||||.||
BL01077___yhf 292 GAAGGCGAGTATTGCAACATTGAAACAGCATCTGGGAAAACTTACACCGG 341
BSNT_01736___ 345 CACAATCTTAATGCATCAAACGTCTGTGCACGTATACAAAGACGCGGGAA 394
|||.||||||||||||||.||.||.|||||.||||||||||||||.||||
BL01077___yhf 342 CACCATCTTAATGCATCAGACATCAGTGCATGTATACAAAGACGCCGGAA 391
BSNT_01736___ 395 AGGCTGAGCGGAATCAAGAGAATATGGAGATCCGCCTAGATGAACCTGTT 444
|.||.||||||||.||..|.|||||||||.|||||.|.||.||||| |.|
BL01077___yhf 392 AAGCCGAGCGGAACCAGAAAAATATGGAGGTCCGCATTGACGAACC-GGT 440
BSNT_01736___ 445 CACTGCCGGA-AAGATACGGAGGAGCTTGGCATTGGCGTCGGAGATTTTG 493
||.|...|.| ||||.||...||.|||.|||||....|||||.||||||.
BL01077___yhf 441 CAATAGTGAAGAAGAAACCCGGGCGCTCGGCATCAATGTCGGCGATTTTA 490
BSNT_01736___ 494 TGTCGTTTGATCCCCGTGTCGAGATCACATCAAGCGGATTTATTAAATCG 543
|.||.||.|||||.||.||.||.|||||..|.|||||.|||||.||||||
BL01077___yhf 491 TCTCCTTCGATCCGCGCGTTGAAATCACGCCGAGCGGGTTTATCAAATCG 540
BSNT_01736___ 544 CGCCATTTGGATGACAAAGCAAGCGTCGCCTTATTGCTCC-------GCT 586
||.|||.|.||.||.||||||||||||||| |||| |||
BL01077___yhf 541 CGTCATCTCGACGATAAAGCAAGCGTCGCC------CTCCTCATCGAGCT 584
BSNT_01736___ 587 TAATTCATGAA--ATTCAA-ACAGAA-----GACATTGAGCTGCCGTATA 628
.| ||| ||| | |||| |||||| |||| |||||.||||
BL01077___yhf 585 GA--TCA-GAACCA-TCAACACAGAAGGGATGACA-----CTGCCTTATA 625
BSNT_01736___ 629 CAACCCATTTTCTTATTTCCAATAATGAAGAAATCGGTTACGGCGGGAAT 678
|.||.||.|||.|.||||||||.|||||||||||||||||.|||||.||.
BL01077___yhf 626 CGACGCACTTTTTAATTTCCAACAATGAAGAAATCGGTTATGGCGGCAAC 675
BSNT_01736___ 679 TCGAATATTCCTCCTGAAACAGTTGAATATTTGGCGGTTGATATGGGGGC 728
||.||.||.||.||||||||.||.|||||||||||.|||||||||||.||
BL01077___yhf 676 TCCAACATCCCGCCTGAAACGGTGGAATATTTGGCTGTTGATATGGGAGC 725
BSNT_01736___ 729 TATCGGTGACGGGCAGGCGACAGATGAATATTCTGTATCAATCTGTGTGA 778
.|||||.||.||.|||.|.||||||||||||.|.|||||.||.|||||.|
BL01077___yhf 726 GATCGGCGATGGACAGTCAACAGATGAATATACGGTATCCATTTGTGTAA 775
BSNT_01736___ 779 AGGATGCGAGCGGGCCGTATCATTATCAGCTCAGAAAGCATTTAGTTCAA 828
|||||||.|||||.||.|||||.||...|||..||||||
BL01077___yhf 776 AGGATGCCAGCGGCCCATATCACTACGGGCTTCGAAAGC----------- 814
BSNT_01736___ 829 TTAGCC------------GAGAAGCATCAT---ATTGACTATAAGCTTGA 863
||| |.|||||| ||| ||.||.|||||||||||
BL01077___yhf 815 ---GCCTGACAGCCCTTTGTGAAGCA-CATGGAATCGATTATAAGCTTGA 860
BSNT_01736___ 864 TATATATCCGTACTACGGGTCTGATGCGTCAGCAGCGATCAAATCCGGGC 913
|||.||.||.||||||||.||.|||||.|||||.||..|||||.|.||.|
BL01077___yhf 861 TATTTACCCATACTACGGTTCAGATGCTTCAGCGGCCGTCAAAGCGGGCC 910
BSNT_01736___ 914 ATGATATTGTACATGGCCTCATAGGGCCGGGAATTGACGCTTCCCATGCA 963
|||||||.||.||.||.||.||.||.||||||||||||||.||||||||.
BL01077___yhf 911 ATGATATCGTCCACGGGCTGATCGGCCCGGGAATTGACGCATCCCATGCG 960
BSNT_01736___ 964 TTTGAACGCACCCATAAATCATCTCTTCG-CCATACCGCTAAGCTTCTGT 1012
||||||.|.||.|||.||||.|| |||.| .||.||.||.|||||.||||
BL01077___yhf 961 TTTGAAAGGACGCATCAATCGTC-CTTGGAGCAGACGGCAAAGCTGCTGT 1009
BSNT_01736___ 1013 ATTACTATGTACAGTC--ACCAATGGTATAA 1041
||.|||||||.||||| || ||||.||||
BL01077___yhf 1010 ATCACTATGTTCAGTCTGAC--ATGGCATAA 1038
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