Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03541 and BL00797
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:25:32
# Commandline: needle
# -asequence dna-align/BSNT_03541___namA.1.5803.seq
# -bsequence dna-align/BL00797___yqjM.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03541___namA-BL00797___yqjM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03541___namA-BL00797___yqjM.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03541___namA
# 2: BL00797___yqjM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1057
# Identity: 754/1057 (71.3%)
# Similarity: 754/1057 (71.3%)
# Gaps: 77/1057 ( 7.3%)
# Score: 2517.5
#
#
#=======================================
BSNT_03541___ 1 -------ATGGCCAGAAAATTATTTACACCTA------TTACAATTAAAG 37
|| .|||||.||||.||||| | ||| ||||
BL00797___yqj 1 TTGAGTAAT----CGAAAACTATTCACACC-ATGGAGTTTA-----AAAG 40
BSNT_03541___ 38 ATATGACGTTAAAAAACCGCATTGTCATGTCGCCAATGTGCATGTATTCT 87
...|.||..||||||||||.||||||||||||||.||||||||||||||.
BL00797___yqj 41 GAGTTACACTAAAAAACCGGATTGTCATGTCGCCGATGTGCATGTATTCC 90
BSNT_03541___ 88 TCTCATGAAAAGGACGGAAAATTAACA-CCGTTCCACATGGCACATTACA 136
||.|||||||||||.||||||.| .|| ||.|||||||||.|.||.||||
BL00797___yqj 91 TCCCATGAAAAGGATGGAAAAGT-GCAGCCTTTCCACATGACCCACTACA 139
BSNT_03541___ 137 TATCGCGCGCAATCGGCCAGGTCGGACTGATTATTGTAGAGGCGTCAGCG 186
|.||.|||||..||||.||.||||||||.||.||.|||||.||..|.||.
BL00797___yqj 140 TCTCCCGCGCCGTCGGACAAGTCGGACTAATCATGGTAGAAGCTACCGCC 189
BSNT_03541___ 187 GTTAACCCTCAAGGACGAATCACTGACCAAGACTTAGGCATTTGGAGCGA 236
||.|..||.||.|||.|||||.|||||||.||..|.|||||.|||...||
BL00797___yqj 190 GTCACTCCGCAGGGAAGAATCTCTGACCAGGATCTGGGCATATGGGATGA 239
BSNT_03541___ 237 CGAGCATATTGAAGGCTTTGCAAAACTGACTGAGCAGGTCAAAGAACAAG 286
||.|||||||||.||..||||...|.|||| ||||.|.|.||||
BL00797___yqj 240 CGCGCATATTGACGGACTTGCTGCATTGAC-------GTCACAAATCAAG 282
BSNT_03541___ 287 --GT------TCAAAAATCGGC-ATTCAGCTTGCCCATGCCGGACGTAAA 327
|| .||||| |||| ||||||.|.||.||.||||||.|.|||
BL00797___yqj 283 ACGTACGGCAGCAAAA--CGGCGATTCAGTTGGCGCACGCCGGAAGAAAA 330
BSNT_03541___ 328 GCTGAGCTTGAAGG-AGATATCTTCGCTCCATCGGCGATTGCGTTTGACG 376
||.|||.|.||||| |.| ||||.||..||.||.||||||.|.||.||||
BL00797___yqj 331 GCCGAGGTCGAAGGTACA-ATCTACGGACCTTCAGCGATTCCTTTCGACG 379
BSNT_03541___ 377 AACAATCAGC-AACACCTGTAGAAATGTCAGCAGAAAAAG----TAAAAG 421
|| |||..|| |||.|||||.||||||.|| |||.|| ||||||
BL00797___yqj 380 AA-AATTCGCGAACGCCTGTTGAAATGACA----AAAGAGGACATAAAAG 424
BSNT_03541___ 422 AAACAGTTCAGGAGTTCAAGCAAGCGGCTGCCCGCGCAAAAGAAGCCGGC 471
||||.|||||||..|||||..|||..||||..|||||.||||..||||||
BL00797___yqj 425 AAACCGTTCAGGCTTTCAAAAAAGGAGCTGAACGCGCGAAAGCCGCCGGC 474
BSNT_03541___ 472 TTTGATGTGATTGAAATTCATGCGGCGCACGGATATTTAATTCATGAATT 521
|||||..|.||.||.|||||||..||.||||||||.||.||..|.|||||
BL00797___yqj 475 TTTGACATCATCGAGATTCATGGAGCCCACGGATACTTGATCAACGAATT 524
BSNT_03541___ 522 TTTGTCTCCGCTTTCCAACCATCGCACAGATGAATACGGCGGCTCACCTG 571
|||.||.||||||||||||.|.|||...|||||||||||.||.|||||.|
BL00797___yqj 525 TTTATCACCGCTTTCCAACAAACGCGAGGATGAATACGGAGGTTCACCGG 574
BSNT_03541___ 572 AAAACCGCTATC--GTTTCTT-GAGAGAGATCATTGATGAAGTCAAACAA 618
|||||||||| | |.|.||| |.|| || ||||.||.|..||.|||.||
BL00797___yqj 575 AAAACCGCTA-CAGGCTGCTTCGCGA-AG-TCATCGACGCTGTAAAAGAA 621
BSNT_03541___ 619 GTATGGGACGGTCCTTTATTTGTCCGTGTATCTGCTTCTGACTACACTGA 668
||.||||.|||.||.|||||.||.||.||.||.|||||.||||||| ..|
BL00797___yqj 622 GTCTGGGCCGGACCATTATTCGTACGCGTTTCAGCTTCAGACTACA-AAA 670
BSNT_03541___ 669 C-AAAGGCTTAGACATTGCCGATCACATCGGTTTTGCAAAATGGATGAAG 717
| ||||||.|.||..|.||||||.|..|||||||.||.||||||||||||
BL00797___yqj 671 CAAAAGGCCTTGATGTCGCCGATTATGTCGGTTTCGCCAAATGGATGAAG 720
BSNT_03541___ 718 GAGCAGGGAGTTGACTTAATTGACTG-CAGCTCAGGCGCCCTTGTTCACG 766
||.|||||.|||||.||.||.|| || ||||||.||.||..||||.|..|
BL00797___yqj 721 GAACAGGGCGTTGATTTGATCGA-TGTCAGCTCCGGTGCTGTTGTGCCTG 769
BSNT_03541___ 767 CAGACATTAACGTATTCCCTGGCTATCAGGTCAGCTTCGCTGAGAAAATC 816
|.||.||.|||||.|||||.|||||.||.|||.|||||||.||.|.|||.
BL00797___yqj 770 CTGATATCAACGTCTTCCCAGGCTACCAAGTCGGCTTCGCCGATACAATT 819
BSNT_03541___ 817 CGTGAACAGGCGGACATGGCTACTGGTGCCGTCGGCATGATTAC-AGACG 865
||.|..||.||.||.||....||.||.||.|||||..||||.|| || .|
BL00797___yqj 820 CGCGCTCAAGCCGAGATTCAGACAGGAGCTGTCGGATTGATCACTAG-TG 868
BSNT_03541___ 866 G--TTCAATGGCTGAAGAAATTCTGCAAAACGGACGTGCCGACCTCATCT 913
| ||||| |||||.|||||.||.|||||.|||||.||.||.||||
BL00797___yqj 869 GCCTTCAA--GCTGAGGAAATCCTCCAAAATGGACGCGCTGATCTCA--- 913
BSNT_03541___ 914 TTATCG--GCA-GAGAGCTTTTGCGGGATCCATTCTTTGCAAGAACTGCT 960
||.||| ||| |.|||||..||.|.|||||||.||...|.|.|||.|||
BL00797___yqj 914 TTTTCGTTGCACGGGAGCTGCTGAGAGATCCATACTGGCCGAAAACCGCT 963
BSNT_03541___ 961 GCGAAACAGCTCAATACAGAGATTCCGGCCCCTGTTCAATACGAAAGAGG 1010
||.||||||.|.||.|||.|.|||...|..||||||||.|||||.||||.
BL00797___yqj 964 GCCAAACAGTTGAACACAAAAATTGAAGGGCCTGTTCAGTACGACAGAGC 1013
BSNT_03541___ 1011 CTGGTAA 1017
|||||||
BL00797___yqj 1014 CTGGTAA 1020
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