Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04263 and BL00402
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:23
# Commandline: needle
# -asequence dna-align/BSNT_04263___pyk.1.5803.seq
# -bsequence dna-align/BL00402___pyk.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04263___pyk-BL00402___pyk.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04263___pyk-BL00402___pyk.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04263___pyk
# 2: BL00402___pyk
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1780
# Identity: 1352/1780 (76.0%)
# Similarity: 1352/1780 (76.0%)
# Gaps: 44/1780 ( 2.5%)
# Score: 5040.5
#
#
#=======================================
BSNT_04263___ 1 ATGAGAAAAACTAAAATTGTTTGTACCATCGGTCCGGCAAGTGAAAGTAT 50
||||||||.||||||||.||||||||.||.||.|||||.||.||||||.|
BL00402___pyk 1 ATGAGAAAGACTAAAATAGTTTGTACAATTGGACCGGCCAGCGAAAGTGT 50
BSNT_04263___ 51 TGAAATGCTTACGAAATTAATGGAGTCAGGAATGAACGTGGCTCGATTAA 100
|||||.|||.||..|..|.|||||..|.||||||||||||||.||..|.|
BL00402___pyk 51 TGAAAAGCTCACCCAGCTGATGGAAGCCGGAATGAACGTGGCGCGCCTGA 100
BSNT_04263___ 101 ACTTTTCTCACGGAGATTTTGAGGAACACGGTGCAAGAATTAAAAATATC 150
|||||||.||.||||||||.||.||.|||||.||||||||||||||.||.
BL00402___pyk 101 ACTTTTCCCATGGAGATTTCGAAGAGCACGGCGCAAGAATTAAAAACATT 150
BSNT_04263___ 151 CGCGAA-------GCAAGTAAAAAACTTGGCAAGAACGTTGGAATTCTGC 193
||.||| ||||| ||.||.||..|..|.||.||.||.|
BL00402___pyk 151 CGTGAAGCAGCCGGCAAG-------CTGGGAAAAGATATCGGCATCCTTC 193
BSNT_04263___ 194 TTGATACAAAAGGTCCTGAAATCCGCACACATACAATGGAAAACGG--CG 241
||||.||.|||||.||||||||||||||.||.|||||||||||||| ||
BL00402___pyk 194 TTGACACGAAAGGGCCTGAAATCCGCACGCACACAATGGAAAACGGTTCG 243
BSNT_04263___ 242 GTATTGAGCTTGAAACAGGCAAAG-------AGCTCATTATTTCAATGGA 284
||.| |||.||||..| ||||.||..||||||||||
BL00402___pyk 244 --ATCG-------AACTGGCAGCGGGTTCTCAGCTGATCGTTTCAATGGA 284
BSNT_04263___ 285 CGAGGTTGTAGGAACAACAGATAAAATTTCAGTGACATATGAAGGTTTAG 334
|||.||..|.||.||..|.||||||||.|||||.||||||||.||.||..
BL00402___pyk 285 CGAAGTCATCGGTACGCCTGATAAAATCTCAGTTACATATGATGGGTTGA 334
BSNT_04263___ 335 TCCATGACGTTGAACAAGGTTCAACGATTCTGTTAGATGACGGCCTTATC 384
|.||.||.||...|...||||||||||||.||.|.||.||.||..|..||
BL00402___pyk 335 TTCACGATGTGTCAGTCGGTTCAACGATTTTGCTTGACGATGGATTGGTC 384
BSNT_04263___ 385 GGTCTTGAGGT-ACTTGATGTAGATGCCGCTAAACGCGAAATCAAAACAA 433
||.|||||.|| || |||..||.|....|..||.||.||||||...||.|
BL00402___pyk 385 GGACTTGAAGTCAC-TGACATAAACAAGGACAAGCGTGAAATCGTCACGA 433
BSNT_04263___ 434 AAGTATTAAACAACGGAACACTCAAAAATAAAAAAGGTGTTAACGTACCG 483
||||..|.||||.||||||..|.|||||.||||||||.||.||.||.|||
BL00402___pyk 434 AAGTGATGAACAGCGGAACGTTGAAAAACAAAAAAGGCGTGAATGTGCCG 483
BSNT_04263___ 484 GGCGTAAGTGTCAATCTTCCGGGTATTACTGAAAAGGATGCGCGAGACAT 533
|||||.||.||||||||||||||.|||||.|||||.|||||....|||||
BL00402___pyk 484 GGCGTCAGCGTCAATCTTCCGGGAATTACGGAAAAAGATGCAAACGACAT 533
BSNT_04263___ 534 CGTTTTCGGTATTGAGCAAGGAGTAGACTTCATCGCACCATCTTTCATTC 583
|||.|||||.||.|||||.||.||.||.||||||||..||||.||..|.|
BL00402___pyk 534 CGTATTCGGCATCGAGCAGGGCGTTGATTTCATCGCGGCATCCTTTGTGC 583
BSNT_04263___ 584 GACGTTCTACGGATGTGCTCGAAATCCGTGAGCTTCTTGAAGAGCACAAC 633
|.|||.|..|||||||.||.||||||||.||.|||||||||||||||||.
BL00402___pyk 584 GCCGTCCGTCGGATGTCCTTGAAATCCGCGAACTTCTTGAAGAGCACAAT 633
BSNT_04263___ 634 GC-TCAGGAAATTCAAATCATCCCTAAAATCGAAAACCAAGAGGGCGTTG 682
|| .|| ||.|||||||||||.||.||||||||||||||.||.|||||||
BL00402___pyk 634 GCGGCA-GATATTCAAATCATTCCAAAAATCGAAAACCAGGAAGGCGTTG 682
BSNT_04263___ 683 ACAACATCGATGCGATTCTCGAAGTGTCTGACGGCTTAATGGTTGCACGC 732
|||||||||||||.|||||.|||||.||.|||||..|.||||||||.||.
BL00402___pyk 683 ACAACATCGATGCCATTCTTGAAGTATCAGACGGTCTGATGGTTGCGCGT 732
BSNT_04263___ 733 GGAGACTTAGGTGTGGAAATTCCAGCTGAAGAAGTGCCGCTTGTGCAAAA 782
||||||.|.|||||.|||||.||.||.||||||||||||||.||.|||||
BL00402___pyk 733 GGAGACCTGGGTGTAGAAATCCCTGCCGAAGAAGTGCCGCTCGTTCAAAA 782
BSNT_04263___ 783 AGAACTGATCAAAAAATGCAACGCGCTGGGCAAACCTGTTATTACAGCAA 832
|||||||||||||||||||||.|||||.|||||.|||||.||.||.||.|
BL00402___pyk 783 AGAACTGATCAAAAAATGCAATGCGCTTGGCAAGCCTGTCATCACGGCTA 832
BSNT_04263___ 833 CACAAATGCTTGACAGCATGCAGCGCAACCCGCGTCCGACTCGTGCGGAA 882
|.||||||||.|||||||||||||||||.|||||.|||||.||.||||||
BL00402___pyk 833 CCCAAATGCTCGACAGCATGCAGCGCAATCCGCGCCCGACACGCGCGGAA 882
BSNT_04263___ 883 GCAAGTGACGTTGCAAACGCGATCTTCGACGGAACAGATGCGATCATGCT 932
||.||.||||||||.||.||||||||.||||||||.||.||.||||||||
BL00402___pyk 883 GCGAGCGACGTTGCCAATGCGATCTTTGACGGAACTGACGCAATCATGCT 932
BSNT_04263___ 933 TTCTGGTGAAACTGCTGCCGGAAGTTATCCGGTTGAAGCAGTTCAAACAA 982
|||.||||||||.||.||.||||.||||||.||||||||.|||||.||.|
BL00402___pyk 933 TTCAGGTGAAACGGCAGCGGGAAATTATCCTGTTGAAGCCGTTCAGACGA 982
BSNT_04263___ 983 TGCATAACATCGCGTCCCGTTCTGAAGAAGCGTTAAATTATAAAGAAATT 1032
||||.||.|||||.||||||||.|||||||||.|.||..|||||.|.||.
BL00402___pyk 983 TGCACAATATCGCTTCCCGTTCAGAAGAAGCGCTCAACCATAAAAAGATC 1032
BSNT_04263___ 1033 CTCTCAAAACGCAGAGATCAAGTTGGCATGACAATTACAGACGCAATTGG 1082
||.||...|||.||..|.|||||..|||||.|||||||.||.||.||.||
BL00402___pyk 1033 CTTTCCGCACGAAGCAAGCAAGTCAGCATGTCAATTACGGATGCGATCGG 1082
BSNT_04263___ 1083 ACAATCTGTCGCACATACGGCGATTAACCTGAATGCTG-CTGCGATCGTA 1131
.||||||||.||.||||||||.||.|||||..||| || .|||.|||||.
BL00402___pyk 1083 CCAATCTGTGGCGCATACGGCAATCAACCTTGATG-TGAATGCCATCGTC 1131
BSNT_04263___ 1132 ACGCCGACAGAAAGCGGCCATACAGCACGTATGATTGCAAAATACCGTCC 1181
||.|||||.||||||||||||||.||..|.||||||.|.|||||.||.||
BL00402___pyk 1132 ACACCGACGGAAAGCGGCCATACGGCGAGAATGATTTCCAAATATCGCCC 1181
BSNT_04263___ 1182 GCAGGCTCCGATTGTTGCGGTTACTGTAAATGACTCTATTTCCAGAAAGC 1231
||||||.||||||||.||.|||||.|||||.||..|..|.||.|||||||
BL00402___pyk 1182 GCAGGCGCCGATTGTCGCAGTTACGGTAAACGATGCGGTGTCAAGAAAGC 1231
BSNT_04263___ 1232 TTGCCCTCGTATCTGGCGTATTCGCGGAAAGCGGCCAAAATGCGAGCTCA 1281
|..|.||.||.|..||.||.|||||...||||||.|||||....|||||.
BL00402___pyk 1232 TGTCACTTGTGTTCGGGGTTTTCGCAACAAGCGGACAAAACCACAGCTCC 1281
BSNT_04263___ 1282 ACAGATGAGATGCTTGAGGATGCTGTCCAAAAATC-ATTGA-ACAGCGGA 1329
||.||.||.||||||||..|.||.||.|||||||| .|.|| ||| ||.
BL00402___pyk 1282 ACTGACGAAATGCTTGAAAAAGCGGTGCAAAAATCTCTCGATACA--GGC 1329
BSNT_04263___ 1330 ATTGTAAAACACGGCGATCTT-ATCGTTATTACAGCAGGCACTGTCGGTG 1378
||.|||...|||||||| ||| ||||||||.||.||.||..|||||||||
BL00402___pyk 1330 ATCGTACGCCACGGCGA-CTTGATCGTTATCACGGCCGGAGCTGTCGGTG 1378
BSNT_04263___ 1379 AGTCCGGCACTACGAACTTAATGAAGGTTCATACTGTCGGCGATATCGTC 1428
|..||||.||.||.|||||.|||||.||..||..||||||.||..|.|||
BL00402___pyk 1379 AAGCCGGTACAACAAACTTGATGAAAGTGTATGTTGTCGGAGACGTGGTC 1428
BSNT_04263___ 1429 GCTAAAGGCCAAGGCATTGGACGCAAATCAGCTTACGGTCCGGTTGTCGT 1478
||.||||||||.|||||.|||||||||||.||.|..|||...||.|||.|
BL00402___pyk 1429 GCAAAAGGCCAGGGCATCGGACGCAAATCCGCATTTGGTGAAGTGGTCAT 1478
BSNT_04263___ 1479 TGCACAAAATGCAAAAGAAGCTGAGCAAAAAATGACTGACGGTGCGGTAC 1528
.||.|||||.|||.|||||||.|...|||||||||..||.||.||.||..
BL00402___pyk 1479 CGCTCAAAACGCACAAGAAGCGGCCAAAAAAATGAAAGATGGCGCCGTTT 1528
BSNT_04263___ 1529 TTGTTACCAAAAGCACTGACCGTGATATGATTGCATCCCTTGAAAAAGCG 1578
|.|||||.||||||||.||.|||||.|||||.||||||||||||||||||
BL00402___pyk 1529 TAGTTACAAAAAGCACGGATCGTGACATGATGGCATCCCTTGAAAAAGCG 1578
BSNT_04263___ 1579 TCTGCTCTTATTACAGAAGAAGGCGGTTTGACTAGCCATGCGGCGGTAGT 1628
.||||.||.|||||.|||||||||||.||.||.|||||.|||||.||.||
BL00402___pyk 1579 GCTGCGCTGATTACGGAAGAAGGCGGCTTAACAAGCCACGCGGCAGTCGT 1628
BSNT_04263___ 1629 CGGATTAAGCCTTGGCATCCCGGTTATCGTGGGTCTGGAAAATGCGACAT 1678
.||.||||||||.||||||||.||.|||||.||..|||||||||||||.|
BL00402___pyk 1629 AGGCTTAAGCCTCGGCATCCCTGTCATCGTCGGAATGGAAAATGCGACTT 1678
BSNT_04263___ 1679 CTATTTTGACAGATGGCCAGGATATTACAGTTGACGCTTCCAGAGGCGCA 1728
|.|||.|||.|||.||..|.||.||.||.||.|||.|..||.|.||.||.
BL00402___pyk 1679 CCATTCTGAAAGAGGGAGAAGACATCACGGTCGACTCCGCCCGCGGAGCT 1728
BSNT_04263___ 1729 GTCTATCAAGGCCGTGCGAGCGTTCTTTAA 1758
||.||..||||.|||||.|||||.||||||
BL00402___pyk 1729 GTATACAAAGGACGTGCAAGCGTGCTTTAA 1758
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