Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_04145 and BL00317
See
Amino acid alignment /
Visit
BSNT_04145 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:12
# Commandline: needle
# -asequence dna-align/BSNT_04145___gerE.1.5803.seq
# -bsequence dna-align/BL00317___gerE.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_04145___gerE-BL00317___gerE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_04145___gerE-BL00317___gerE.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_04145___gerE
# 2: BL00317___gerE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 225
# Identity: 201/225 (89.3%)
# Similarity: 201/225 (89.3%)
# Gaps: 0/225 ( 0.0%)
# Score: 909.0
#
#
#=======================================
BSNT_04145___ 1 TTGAAGGAGAAAGAATTTCAATCGAAGCCGCTGCTAACGAAAAGAGAAAG 50
||||||||||||||.||||||||.||||||||||||||.|||||||||||
BL00317___ger 1 TTGAAGGAGAAAGAGTTTCAATCAAAGCCGCTGCTAACAAAAAGAGAAAG 50
BSNT_04145___ 51 AGAAGTGTTCGAATTGCTCGTTCAAGATAAGACAACAAAGGAGATTGCAA 100
|||||||||||||||||||||||||||.||||||||||||||.||.||||
BL00317___ger 51 AGAAGTGTTCGAATTGCTCGTTCAAGACAAGACAACAAAGGAAATCGCAA 100
BSNT_04145___ 101 GCGAGCTATTTATCAGTGAGAAAACCGTTCGAAACCATATTTCAAATGCC 150
|||||||.|||||.|||||.||.||.||.||.||.||.|||||.|||||.
BL00317___ger 101 GCGAGCTCTTTATAAGTGAAAAGACTGTACGTAATCACATTTCCAATGCA 150
BSNT_04145___ 151 ATGCAGAAATTGGGTGTGAAAGGGCGTTCGCAAGCCGTTGTTGAGCTTCT 200
|||||.||||||||.||||||||.|||||||||||.||||||||.|||||
BL00317___ger 151 ATGCAAAAATTGGGAGTGAAAGGCCGTTCGCAAGCTGTTGTTGAACTTCT 200
BSNT_04145___ 201 TAGAATGGGTGAGCTAGAGCTTTAA 225
|.|||||||||||||||||||.|||
BL00317___ger 201 TCGAATGGGTGAGCTAGAGCTCTAA 225
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.