Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06047 and BL00229
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:04
# Commandline: needle
# -asequence dna-align/BSNT_06047___dra.1.5803.seq
# -bsequence dna-align/BL00229___deoC.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06047___dra-BL00229___deoC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06047___dra-BL00229___deoC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06047___dra
# 2: BL00229___deoC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 690
# Identity: 522/690 (75.7%)
# Similarity: 522/690 (75.7%)
# Gaps: 36/690 ( 5.2%)
# Score: 1978.5
#
#
#=======================================
BSNT_06047___ 1 ATGTC-ATTAGCCAACATAATTGATCATACAGCTTTGAAACCGCATACAC 49
|||.| ||| ||.||..|.||||||||||||||.||||||||||||||||
BL00229___deo 1 ATGACGATT-GCAAATCTCATTGATCATACAGCATTGAAACCGCATACAC 49
BSNT_06047___ 50 AAAAAGCGGACATTCTAAAACTAATTGAAGAAGCGAAAACATACAAATTT 99
|||||.|.||.|||...|||.||||.||||||||||||.|||||.||||.
BL00229___deo 50 AAAAATCCGAGATTAAGAAATTAATAGAAGAAGCGAAAGCATACCAATTC 99
BSNT_06047___ 100 GCTTCAGTATGTGTCAATCCGACATGGGTGGAGCTTGCTGCAAAAGAGCT 149
||||||||.||.|||||.|||||||||||.||..||||.||..|||||||
BL00229___deo 100 GCTTCAGTCTGCGTCAACCCGACATGGGTCGAATTTGCCGCCGAAGAGCT 149
BSNT_06047___ 150 TAAGGGAACTGGAGTCGACGTTTGTACGGTCATCGGCTTCCCGCTCGGTG 199
.||||||||.|.|.||||||||||.|||||||||||.||.|||||.||.|
BL00229___deo 150 GAAGGGAACGGAAATCGACGTTTGCACGGTCATCGGTTTTCCGCTGGGCG 199
BSNT_06047___ 200 CCAATACAACTGAAACAAAAGCGTTCGAAACAAAAGACGCGATTTCAAAA 249
||||.||.||.||.|||||||||||.||||||||||||||.||..|||||
BL00229___deo 200 CCAACACGACAGAGACAAAAGCGTTTGAAACAAAAGACGCTATCGCAAAA 249
BSNT_06047___ 250 GGCGCCACTGAAGTGGATATGGTCATTAATATTGCCGCTTTAAAAGACAA 299
|||||.||.||.|||||.||||||||.||.||.|||||||||||||||
BL00229___deo 250 GGCGCGACAGAGGTGGACATGGTCATCAACATCGCCGCTTTAAAAGAC-- 297
BSNT_06047___ 300 GGAAGACGATG---TGGTGGAAGCTGATATCCGCGGTGTAGTGGAAGCTG 346
|||| |||||| |.||.||.||.||.|||||||..||.||.|||||.|
BL00229___deo 298 GGAA-ACGATGACTTTGTCGAGGCCGACATCCGCGCGGTCGTTGAAGCCG 346
BSNT_06047___ 347 CAGCCGGAAAAGCGCTTGTCAAAGTCATTATCGAAACGTGCCTTCTGACT 396
||...||.|||||||||||.||||||||.||.||||||||.||..||||.
BL00229___deo 347 CAAAAGGTAAAGCGCTTGTTAAAGTCATCATTGAAACGTGTCTGTTGACA 396
BSNT_06047___ 397 GATGAAGAAAAAGAACGTGCATGCCGTTTAGCGGTGTCTGCGGGAGCGGA 446
||.|||||||||||.||.||.|||||..|.||.||..||||.||.||.||
BL00229___deo 397 GACGAAGAAAAAGAGCGCGCCTGCCGCCTGGCTGTTGCTGCCGGTGCCGA 446
BSNT_06047___ 447 TTTCGTAAAAACATCAACAGGCTTTTCTACAGGCGGCGCAACGAAGGAAG 496
.||.||.|||||.|||||.||.||.||.||.|||||.||.||...|||||
BL00229___deo 447 CTTTGTCAAAACCTCAACCGGGTTCTCAACCGGCGGAGCGACAGCGGAAG 496
BSNT_06047___ 497 ATATCGCCTTAATGCGCAAAACAGTAGGACCTGATATCGGCGTGAAAGCA 546
||||||||.|.|||||.|||||.||.||||||||.|||||.||.||||||
BL00229___deo 497 ATATCGCCCTGATGCGGAAAACCGTCGGACCTGACATCGGTGTCAAAGCA 546
BSNT_06047___ 547 TCTGGCGGAATCAGAACGAAAGAAGATGTAGACACAATGGTTGAGGCT-- 594
||.||.||.||..|.||.|||||.||.||.||.||.|||.| ||
BL00229___deo 547 TCCGGAGGGATTCGTACAAAAGAGGACGTTGAAACCATGAT-----CTCA 591
BSNT_06047___ 595 ---GGTGCAAGCCGAATTGGCGCCAGCGCAGGCGTTTCTATCGT------ 635
||.||.|.|||.||.||.||.||||||||||||||.|||||
BL00229___deo 592 AACGGCGCGACCCGGATCGGTGCAAGCGCAGGCGTTTCCATCGTCAGCGG 641
BSNT_06047___ 636 ---AAAAGGAGAAAATGCATCAGGCGGAGACAACTATTAA 672
|.|||||.||||| |.|||.|||||.|||
BL00229___deo 642 AGCAGAAGGAAAAAAT---------GAAGATAACTACTAA 672
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