Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06290 and BL00111
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:28:15
# Commandline: needle
# -asequence dna-align/BSNT_06290___jag.1.5803.seq
# -bsequence dna-align/BL00111___jag.2.5803.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06290___jag-BL00111___jag.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06290___jag-BL00111___jag.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06290___jag
# 2: BL00111___jag
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 664
# Identity: 424/664 (63.9%)
# Similarity: 424/664 (63.9%)
# Gaps: 77/664 (11.6%)
# Score: 1163.5
#
#
#=======================================
BSNT_06290___ 1 GTG-AGGAATGTGACTGCTGCAGGGCGAAATGTCGATGAAGCAGTACAGT 49
||| ||||| .||||||||.|.||.||.|..||||||||||||||.||.|
BL00111___jag 1 GTGAAGGAA-CTGACTGCTACTGGACGTACCGTCGATGAAGCAGTGCAAT 49
BSNT_06290___ 50 CC-GGATTGCAAGAGCTGGG-ATTAACGAAGGATAAGGTAGAAAT----- 92
|| ||.||| ||.||||||| .||.|.|.| |||.|.||.|||.|
BL00111___jag 50 CCGGGCTTG-AACAGCTGGGCCTTCATGCA-GATGATGTCGAAGTCGACG 97
BSNT_06290___ 93 TATTATTATTGAAGAGGGAAACAAAGGG-TTTCTCGGCATTTTCGGCAAA 141
|| .||||.||.||||| |||||| ||..|||||||||||||..|.
BL00111___jag 98 TA-----GTTGATGAAGGAAA-AAAGGGATTATTCGGCATTTTCGGTCAT 141
BSNT_06290___ 142 AAGCCTGCGATCGTAAAGCT--GGTTGAAAAGATTGATCCGATTCAGCAA 189
..|.||||..||||.||..| || |||||.||.||.|||.||.|..||
BL00111___jag 142 CGGTCTGCAGTCGTGAACATTCGG--GAAAAAATAGACCCGGTTAAAGAA 189
BSNT_06290___ 190 GCGAAGTTATATCTTCAAACGATCGCCGAAGCCATTGC-----CGGGAAG 234
||.||...||||.|..||| |.|..|||.| .|||||
BL00111___jag 190 GCAAAACAATATTTGGAAA---------ATGTAATTTCGAATATGGGAA- 229
BSNT_06290___ 235 T-----CTGATGTGACTGTTCAAGA--AAGCAAAAAGACAGTGAGATATC 277
| |..|.|||||.|...|||| |..|.|||.| ||||...|.||
BL00111___jag 230 TACAAGCCCAGGTGACGGCAGAAGAGGAGTCTAAACG--AGTGGTTTTTC 277
BSNT_06290___ 278 ATATAACAGGTGAAAAGGCAGCATTGTTGATTGGGAAAAGAGGACAAACC 327
|..|.|.|||.||.||..||||..|.||.|||||.|||||.||||||||.
BL00111___jag 278 AGTTGAAAGGAGACAAAACAGCTCTTTTAATTGGAAAAAGGGGACAAACT 327
BSNT_06290___ 328 TTAAACGCTCTTGAAACTTTGACACAGCTTGCCCTTAACCGTTATCCAGG 377
|||||.||.||||||||..||||.|||||.|..||.||.|||.||.|.|.
BL00111___jag 328 TTAAATGCCCTTGAAACGCTGACGCAGCTCGTGCTCAATCGTCATTCCGA 377
BSNT_06290___ 378 CCAATA----CAAAAATGTGACGGTGGATGCAGAAAACTATCGTTTGAAA 423
|..||| ||| |.|..|||.||.||.|||...||.|| .|.||
BL00111___jag 378 CAGATATATCCAA----GCGGTGGTTGACGCCGAAGGATACCG--CGCAA 421
BSNT_06290___ 424 A--GAAAAGAAACACTGAGC-CAGCTGGCCATCAAGCTTGCTGACCA--- 467
| |.||.|||||||| .|| ||||||||..|.||||||||||||||
BL00111___jag 422 AGCGGAAGGAAACACT-TGCTCAGCTGGCATTGAAGCTTGCTGACCAGGC 470
BSNT_06290___ 468 ----AGTTTTGAAAACGAAAAAATCCATCCAGCTTGAGCCTATGCCGTCC 513
|| |.| |||||||..|||.||.||.|||||.|||||.|||
BL00111___jag 471 GGCCAG----GCA---GAAAAAAGACATTCACCTGGAGCCGATGCCTTCC 513
BSNT_06290___ 514 AGCGAAAGAAAAATTATTCACGATACTCTTTCTGGATATGCAAACCACCA 563
||.||..|.||..|.||.||.|||||.|||.|.||.||..| .||.||
BL00111___jag 514 AGTGAGCGCAAGGTCATCCATGATACGCTTGCGGGCTACTC---GCAGCA 560
BSNT_06290___ 564 GATCAAAACATATTCAATGGGTGAAGGCGAAAATCGTCATCTCGTTATTT 613
.|||.||||.||.||.|..|||||||.|.|.||.||.||.||.||.||.|
BL00111___jag 561 TATCGAAACTTACTCTACCGGTGAAGACCATAACCGGCACCTTGTCATCT 610
BSNT_06290___ 614 CCCATAAAAGATAG 627
|..||||||.|||.
BL00111___jag 611 CATATAAAAAATAA 624
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